RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ZDHHC1Q8WTX9 485 aa14.08□□□□□ -0.15
SDF4-207ENST00000494748 ATOH1Q92858 354 aaPredicted RBP14.08□□□□□ -0.15
SDF4-207ENST00000494748 PBX4Q9BYU1 374 aa14.08□□□□□ -0.15
SDF4-207ENST00000494748 A0A0B4J2E0 115 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 A0A1B0GX12 115 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 CBX7O95931 251 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 PCCBP05166 539 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 SREBF2Q12772 1141 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 PDZD9Q8IXQ8 264 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 MUC20Q8N307 709 aaPredicted RBP14.08□□□□□ -0.16
SDF4-207ENST00000494748 POMGNT2Q8NAT1 580 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 CLRN3Q8NCR9 226 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 KREMEN2Q8NCW0 462 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 OR6K3Q8NGY3 331 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 ZPLD1Q8TCW7 415 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 DOK4Q8TEW6 326 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 MIB2Q96AX9 1013 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 V9GY05 133 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 ACOT7O00154 380 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 ZFPL1O95159 310 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 DBIP07108 87 aaKnown RBP14.08□□□□□ -0.16
SDF4-207ENST00000494748 MRPS10P82664 201 aaKnown RBP14.08□□□□□ -0.16
SDF4-207ENST00000494748 DCST2Q5T1A1 773 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 ARHGAP11AQ6P4F7 1023 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 VN1R4Q7Z5H5 301 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 PAQR7Q86WK9 346 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 MFSD9Q8NBP5 474 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 OR2AK2Q8NG84 335 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 NSMAFQ92636 917 aa14.08□□□□□ -0.16
SDF4-207ENST00000494748 FXYD6-FXYD2A0A087WZ82 144 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 TRAV14DV4A0A0A6YYC5 116 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 GPRIN2O60269 458 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 LDOC1O95751 146 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 BTN3A2P78410 334 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 ILF3Q12906 894 aaKnown RBP eCLIP14.07□□□□□ -0.16
SDF4-207ENST00000494748 DHCR24Q15392 516 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 ZNF425Q6IV72 752 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 ZAR1Q86SH2 424 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 BIVMQ86UB2 503 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 OR4N5Q8IXE1 308 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 OR4K13Q8NH42 304 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 S100A16Q96FQ6 103 aaKnown RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 FXYD6Q9H0Q3 95 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 PRR19A6NJB7 356 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 CHURC1-FNTBB4DL54 471 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 GLSO94925 669 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 RAB40ALP0C0E4 278 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 CALCBP10092 127 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 RPA2P15927 270 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 RAB3AP20336 220 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 PABPC1L2AQ5JQF8 200 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 RELL2Q8NC24 303 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 OR4C16Q8NGL9 310 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 RAB40AQ8WXH6 277 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 ST8SIA2Q92186 375 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 TSPAN10Q9H1Z9 355 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 ZNF175Q9Y473 711 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 P2RY2P41231 377 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 HNRNPA1L2Q32P51 320 aaKnown RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 LRRTM1Q86UE6 522 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 ZNF433Q8N7K0 673 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 OR52E1Q8NGJ3 308 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 C1orf216Q8TAB5 229 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 GRHL3Q8TE85 626 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 COL26A1Q96A83 441 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 ZNF707Q96C28 371 aaPredicted RBP14.07□□□□□ -0.16
SDF4-207ENST00000494748 GINS4Q9BRT9 223 aa14.07□□□□□ -0.16
SDF4-207ENST00000494748 F5H5P2 479 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 PQBP1O60828 265 aaKnown RBP14.06□□□□□ -0.16
SDF4-207ENST00000494748 LDB3O75112 727 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 H2AFB1P0C5Y9 115 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 MAP3K8P41279 467 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 TNFRSF17Q02223 184 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 ZNF613Q6PF04 617 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 STAC2Q6ZMT1 411 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 DND1Q8IYX4 353 aaKnown RBP14.06□□□□□ -0.16
SDF4-207ENST00000494748 PCDHB16Q9NRJ7 776 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 ZNF281Q9Y2X9 895 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 PRELID3BQ9Y3B1 194 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 MCIDASD6RGH6 385 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 GOSR2O14653 212 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 TMEM127O75204 238 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 APOC3P02656 99 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 MAPK3P27361 379 aaPredicted RBP14.06□□□□□ -0.16
SDF4-207ENST00000494748 DIO1P49895 249 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 DEFB103AP81534 67 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 GAS6Q14393 721 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 LINC00114Q6XXX2 140 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 CDK20Q8IZL9 346 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 SNX33Q8WV41 574 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 PLEKHM1Q9Y4G2 1056 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 LAMP2P13473 410 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 LAG3P18627 525 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 SLC6A6P31641 620 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 NPEPL1Q8NDH3 523 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 NMNAT2Q9BZQ4 307 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 WDR13Q9H1Z4 485 aa14.06□□□□□ -0.16
SDF4-207ENST00000494748 MBNL1Q9NR56 388 aaKnown RBP14.06□□□□□ -0.16
SDF4-207ENST00000494748 MED11Q9P086 117 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms