RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 CYP2R1Q6VVX0 501 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF417Q8TAU3 575 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 TMEM255BQ8WV15 326 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 C7orf34Q96L11 122 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 MOGAT1Q96PD6 335 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF587Q96SQ5 575 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-208ENST00000494334 BTBD10Q9BSF8 475 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 SLC19A3Q9BZV2 496 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 MEPEQ9NQ76 525 aaPredicted RBP12.02□□□□□ -0.49
COL1A1-208ENST00000494334 ELOVL5Q9NYP7 299 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 EMC3Q9P0I2 261 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 RHCGQ9UBD6 479 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 NOSIPQ9Y314 301 aaKnown RBP12.02□□□□□ -0.49
COL1A1-208ENST00000494334 FLVCR1Q9Y5Y0 555 aa12.02□□□□□ -0.49
COL1A1-208ENST00000494334 HCFC1P51610 2035 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 HECTD1Q9ULT8 2610 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 KPNA4O00629 521 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 HNRNPRO43390 633 aaKnown RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 SEMG1P04279 462 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 POU2F1P14859 743 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 ATP6V1B2P21281 511 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 IFNA8P32881 189 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 RBM34P42696 430 aaKnown RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 OR3A2P47893 321 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 PCYT1AP49585 367 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 UGT2B15P54855 530 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 SORDQ00796 357 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 EXOC3L2Q2M3D2 409 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 IQCCQ4KMZ1 466 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 DNAL1Q4LDG9 190 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 BEND4Q6ZU67 534 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 H1FNTQ75WM6 255 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 GPAT4Q86UL3 456 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 STK32CQ86UX6 486 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 KIF18BQ86Y91 864 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 OFCC1Q8IZS5 231 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 KDM8Q8N371 416 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 C10orf53Q8N6V4 93 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 ZIC4Q8N9L1 334 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 OR9K2Q8NGE7 335 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 TMEM239Q8WW34 195 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 HS6ST2Q96MM7 605 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF385AQ96PM9 386 aaKnown RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 FNDC11Q9BVV2 318 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 MAN2C1Q9NTJ4 1040 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 NDUFAF4Q9P032 175 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 C6orf203Q9P0P8 240 aaPredicted RBP12.01□□□□□ -0.49
COL1A1-208ENST00000494334 PRSS50Q9UI38 385 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 RASD1Q9Y272 281 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 B3GALT5Q9Y2C3 310 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 CORINQ9Y5Q5 1042 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 ENPP4Q9Y6X5 453 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 V9GYQ6 96 aa12.01□□□□□ -0.49
COL1A1-208ENST00000494334 MS4A18H0YCH9 400 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 hCG_2039718K7EN88 272 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MRPL33O75394 65 aaKnown RBP12□□□□□ -0.49
COL1A1-208ENST00000494334 CH25HO95992 272 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MT-ATP6P00846 226 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MT-ND1P03886 318 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 PEX19P40855 299 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
COL1A1-208ENST00000494334 VLDLRP98155 873 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 POU4F3Q15319 338 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF74Q16587 644 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MS4A18Q3C1V0 323 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 LCN8Q6JVE9 175 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 PGM2L1Q6PCE3 622 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 CREB3L2Q70SY1 520 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 DHFR2Q86XF0 187 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 EPHX4Q8IUS5 362 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF100Q8IYN0 542 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 SCAIQ8N9R8 606 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 ADPRHL1Q8NDY3 354 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 PIK3C3Q8NEB9 887 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 PFN4Q8NHR9 129 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 LINC01560Q8TB33 94 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MARVELD3Q96A59 401 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 TMEM45BQ96B21 275 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 ASB9Q96DX5 294 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 ASPNQ9BXN1 380 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MUC13Q9H3R2 512 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 MRPL39Q9NYK5 338 aaKnown RBP12□□□□□ -0.49
COL1A1-208ENST00000494334 B3GAT1Q9P2W7 334 aa12□□□□□ -0.49
COL1A1-208ENST00000494334 LOC102725191A0A1B0GVB3 256 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 TCRBV5S2A0A599 114 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 TUBAL3A6NHL2 446 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 ENO4A6NNW6 628 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 ACOT8O14734 319 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 GSC2O15499 205 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 DNAJC8O75937 253 aaPredicted RBP11.99□□□□□ -0.49
COL1A1-208ENST00000494334 ATP5HO75947 161 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 DIRAS1O95057 198 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 IGF2P01344 180 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
COL1A1-208ENST00000494334 ZNF43P17038 809 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 RHCEP18577 417 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 KIR2DL3P43628 341 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
COL1A1-208ENST00000494334 TRAM2Q15035 370 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms