RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 ZNF583Q96ND8 569 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 OR10A4Q9H209 315 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 SLC7A10Q9NS82 523 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 MRGBPQ9NV56 204 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 ASB6Q9NWX5 421 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 SELENONQ9NZV5 590 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 UPB1Q9UBR1 384 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 CIB4A0PJX0 185 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 M0R082 166 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 CLOCKO15516 846 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 SHOX2O60902 331 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 CDH2P19022 906 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 GGT1P19440 569 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 GRPRP30550 384 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 SELENOPP49908 381 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 IL1RL1Q01638 556 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 LTBQ06643 244 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 FOXD4Q12950 439 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 PPA1Q15181 289 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 DEFB113Q30KQ7 82 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 LRRC23Q53EV4 343 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 ENTPD8Q5MY95 495 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 FAM69AQ5T7M9 428 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 INTS11Q5TA45 600 aaKnown RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 SLC30A8Q8IWU4 369 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF417Q8TAU3 575 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 NEUROG1Q92886 237 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 SLC38A4Q969I6 547 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 ZNF587Q96SQ5 575 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 FOXC2Q99958 501 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 SH3GL1Q99961 368 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 SF3B5Q9BWJ5 86 aaKnown RBP12.95□□□□□ -0.34
ATG4B-224ENST00000494132 C12orf10Q9HB07 376 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 GID8Q9NWU2 228 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 NPAP1Q9NZP6 1156 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 MALT1Q9UDY8 824 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 PLCE1Q9P212 2302 aa12.95□□□□□ -0.34
ATG4B-224ENST00000494132 TRAV36DV7A0A075B6V5 113 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 A0A087WUJ7 227 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 SLC22A2O15244 555 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 CCDC22O60826 627 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 THY1P04216 161 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 CLDN17P56750 224 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 BSPH1Q075Z2 132 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 ACKR1Q16570 336 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 FAM91A1Q658Y4 838 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 NIPAL3Q6P499 406 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 SPNS3Q6ZMD2 512 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 WDR88Q6ZMY6 472 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 CREB3L2Q70SY1 520 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 EPHX4Q8IUS5 362 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 C10orf53Q8N6V4 93 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 RP9Q8TA86 221 aaKnown RBP12.94□□□□□ -0.34
ATG4B-224ENST00000494132 HSD17B8Q92506 261 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 TMEM45BQ96B21 275 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 MOGAT1Q96PD6 335 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 ALKBH3Q96Q83 286 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-224ENST00000494132 CCL19Q99731 98 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 C1QTNF6Q9BXI9 259 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 SLCO5A1Q9H2Y9 848 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 PARPBPQ9NWS1 579 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 CMTM6Q9NX76 183 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 TAS2R16Q9NYV7 291 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 PRDM4Q9UKN5 801 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 EDARQ9UNE0 448 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 SH3GLB1Q9Y371 365 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 CELSR1Q9NYQ6 3014 aa12.94□□□□□ -0.34
ATG4B-224ENST00000494132 ITPR3Q14573 2671 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 DPRXA6NFQ7 191 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 OR5H1A6NKK0 313 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 FAM220BPB1ANY3 271 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 KPNA4O00629 521 aaPredicted RBP12.93□□□□□ -0.34
ATG4B-224ENST00000494132 CNOT4O95628 575 aaKnown RBP12.93□□□□□ -0.34
ATG4B-224ENST00000494132 HPRP00739 348 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 NPPAP01160 153 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 BGLAPP02818 100 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 C8BP07358 591 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 DRD4P21917 467 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 LSP1P33241 339 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 NR1H2P55055 460 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 GNGT1P63211 74 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 GABRA6Q16445 453 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 ADAM5Q6NVV9 412 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 CCDC80Q76M96 950 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 CARM1Q86X55 608 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 KBTBD8Q8NFY9 601 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 OR2T12Q8NG77 320 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 ADAMTS16Q8TE57 1224 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 AKAP1Q92667 903 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATG4B-224ENST00000494132 MUCL1Q96DR8 90 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 ALPK1Q96QP1 1244 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 B3GAT1Q9P2W7 334 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 SLC7A7Q9UM01 511 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 RASD1Q9Y272 281 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 HIVEP1P15822 2718 aa12.93□□□□□ -0.34
ATG4B-224ENST00000494132 PDLIM1O00151 329 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 CHP2O43745 196 aa12.92□□□□□ -0.34
ATG4B-224ENST00000494132 OR2T1O43869 369 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms