RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 C15orf38-AP3S2A0A0A6YYH1 394 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 A0A1B0GUA9 196 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 A6NIZ1 184 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 HSD17B6O14756 317 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 CPLX1O14810 134 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 IGHV4-34P06331 123 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 CHTF8P0CG12 524 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 RCC1P18754 421 aaPredicted RBP2.32□□□□□ -2.04
SMC4-223ENST00000493695 PCMT1P22061 227 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 RPL13AP40429 203 aaKnown RBP2.32□□□□□ -2.04
SMC4-223ENST00000493695 GBX2P52951 348 aaPredicted RBP2.32□□□□□ -2.04
SMC4-223ENST00000493695 PFN3P60673 137 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 RAP1BP61224 184 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 TGFBR3Q03167 851 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 OR52E8Q6IFG1 317 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 TRIM69Q86WT6 500 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 BLOC1S5Q8TDH9 187 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 SLC38A2Q96QD8 506 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 RNF2Q99496 336 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 TSG101Q99816 390 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 P2RY13Q9BPV8 354 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 TMEM43Q9BTV4 400 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 DEFB127Q9H1M4 99 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 MTRF1LQ9UGC7 380 aaKnown RBP2.32□□□□□ -2.04
SMC4-223ENST00000493695 PTBP2Q9UKA9 531 aaKnown RBP2.32□□□□□ -2.04
SMC4-223ENST00000493695 COPS3Q9UNS2 423 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 TP53TG5Q9Y2B4 290 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 PRG3Q9Y2Y8 225 aaPredicted RBP2.32□□□□□ -2.04
SMC4-223ENST00000493695 ATAD2BQ9ULI0 1458 aa2.32□□□□□ -2.04
SMC4-223ENST00000493695 IGKV1D-17A0A075B6S4 117 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 A0A0G2JLM5 398 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 UGT1A9O60656 530 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 HSMCR30P0CW71 290 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 TDGF1P13385 188 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 ANXA13P27216 316 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 GLP1RP43220 463 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 TDGF1P3P51864 188 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 PKNOX1P55347 436 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 TAS2R19P59542 299 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 IL24Q13007 206 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 C16orf72Q14CZ0 275 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 OXA1LQ15070 435 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 DUSP7Q16829 419 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 KCTD19Q17RG1 926 aaPredicted RBP2.31□□□□□ -2.04
SMC4-223ENST00000493695 MICBQ29980 383 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 XKR4Q5GH76 650 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 TIGD3Q6B0B8 471 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 TMIGD1Q6UXZ0 262 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 ACP7Q6ZNF0 438 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 FAM71E2Q8N5Q1 922 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 OR6C4Q8NGE1 309 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 OR52H1Q8NGJ2 320 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 OR5D13Q8NGL4 314 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 MAGEE2Q8TD90 523 aaPredicted RBP2.31□□□□□ -2.04
SMC4-223ENST00000493695 PHF10Q8WUB8 498 aaKnown RBP2.31□□□□□ -2.04
SMC4-223ENST00000493695 FAM151AQ8WW52 585 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 FGF14Q92915 247 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 TIMD4Q96H15 378 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 ITCHQ96J02 903 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 PSKH2Q96QS6 385 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 MRPL45Q9BRJ2 306 aaKnown RBP2.31□□□□□ -2.04
SMC4-223ENST00000493695 TMEM246Q9BRR3 403 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 CAPS2Q9BXY5 557 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 NIPAL2Q9H841 368 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 NHEJ1Q9H9Q4 299 aaPredicted RBP2.31□□□□□ -2.04
SMC4-223ENST00000493695 ADAM28Q9UKQ2 775 aa2.31□□□□□ -2.04
SMC4-223ENST00000493695 A0A1W2PPE3 182 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 CLRN2A0PK11 232 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 GPR89AB7ZAQ6 455 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 AGPAT2O15120 278 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 MBTPS2O43462 519 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 INSP01308 110 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 GPR89BP0CG08 455 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 DBTP11182 482 aaKnown RBP2.3□□□□□ -2.04
SMC4-223ENST00000493695 ICAM2P13598 275 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 CRISP2P16562 243 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 IL12AP29459 219 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 GNA11P29992 359 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 CCR1P32246 355 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 ARRB1P49407 418 aaPredicted RBP2.3□□□□□ -2.04
SMC4-223ENST00000493695 PRPS1P60891 318 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 SELENOTP62341 195 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 ARFRP1Q13795 201 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 NRF1Q16656 503 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 DGUOKQ16854 277 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 FILIP1LQ4L180 1135 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 TMEM255AQ5JRV8 349 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 GPR157Q5UAW9 335 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 ZSCAN25Q6NSZ9 544 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 PGAP1Q75T13 922 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 DHDDSQ86SQ9 333 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 RALGPS2Q86X27 583 aaPredicted RBP2.3□□□□□ -2.04
SMC4-223ENST00000493695 PIANPQ8IYJ0 282 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 ZNF679Q8IYX0 411 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 ZCCHC7Q8N3Z6 543 aaKnown RBP2.3□□□□□ -2.04
SMC4-223ENST00000493695 NPBQ8NG41 125 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 SCFD1Q8WVM8 642 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 UFD1Q92890 307 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 FGF11Q92914 225 aa2.3□□□□□ -2.04
SMC4-223ENST00000493695 CMTM7Q96FZ5 175 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms