RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 PON3Q15166 354 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 RNPS1Q15287 305 aaKnown RBP10.34□□□□□ -0.75
LSM2-214ENST00000493387 EIF2S3LQ2VIR3 472 aaKnown RBP10.34□□□□□ -0.75
LSM2-214ENST00000493387 EMC4Q5J8M3 183 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 OTUD3Q5T2D3 398 aaPredicted RBP10.34□□□□□ -0.75
LSM2-214ENST00000493387 EEF1A1P5Q5VTE0 462 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 TMEM225Q6GV28 225 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 OR2A2Q6IF42 318 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 ZNF770Q6IQ21 691 aaPredicted RBP10.34□□□□□ -0.75
LSM2-214ENST00000493387 HMBOX1Q6NT76 420 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 PGBD2Q6P3X8 592 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 B3GNT6Q6ZMB0 384 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 FCRLAQ7L513 359 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 SLC46A3Q7Z3Q1 461 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 ZER1Q7Z7L7 766 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 OAFQ86UD1 273 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 MCEMP1Q8IX19 187 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 AQP11Q8NBQ7 271 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 RELTQ969Z4 430 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 ZNF845Q96IR2 970 aaPredicted RBP10.34□□□□□ -0.75
LSM2-214ENST00000493387 ZFP3Q96NJ6 502 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 MOGAT1Q96PD6 335 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 TRIB1Q96RU8 372 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 SF3B5Q9BWJ5 86 aaKnown RBP10.34□□□□□ -0.75
LSM2-214ENST00000493387 SEMA6AQ9H2E6 1030 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 KLHL9Q9P2J3 617 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 CLCF1Q9UBD9 225 aa10.34□□□□□ -0.75
LSM2-214ENST00000493387 TRGV8A0A0C4DH27 118 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 A0A1B0GUH1 482 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 UNC119BA6NIH7 251 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 M0R082 166 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 PLPP3O14495 311 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 GPR171O14626 319 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 KLF4O43474 513 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 MGRN1O60291 552 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 CYTIPO60759 359 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 AKR7A3O95154 331 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 RCBTB2O95199 551 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 MAKP20794 623 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 TIMP3P35625 211 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 GPR4P46093 362 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 PRPS1P60891 318 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ZP4Q12836 540 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 PPP1R8Q12972 351 aaKnown RBP10.33□□□□□ -0.76
LSM2-214ENST00000493387 ZBED5Q49AG3 693 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 PPP4R4Q6NUP7 873 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 RPL13AP3Q6NVV1 102 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 MTFR2Q6P444 385 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 CD300LDQ6UXZ3 194 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 NANOGNBQ7Z5D8 188 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 TMEM179BQ7Z7N9 219 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 STK32CQ86UX6 486 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 TMEM99Q8N816 258 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ATG16L2Q8NAA4 619 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ICA1LQ8NDH6 482 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 OR9Q2Q8NGE9 314 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ZNF417Q8TAU3 575 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 FNDC9Q8TBE3 224 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 RNF128Q8TEB7 428 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ROBO4Q8WZ75 1007 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 FAM46AQ96IP4 442 aaKnown RBP10.33□□□□□ -0.76
LSM2-214ENST00000493387 OXGR1Q96P68 337 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ZNF587Q96SQ5 575 aaPredicted RBP10.33□□□□□ -0.76
LSM2-214ENST00000493387 FEVQ99581 238 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 C9orf16Q9BUW7 83 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 GABARAPL1Q9H0R8 117 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 RNF122Q9H9V4 155 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 RNPEPL1Q9HAU8 725 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 C8orf4Q9NR00 106 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 EMC3Q9P0I2 261 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 KIF17Q9P2E2 1029 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 ENOPH1Q9UHY7 261 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 OSGIN2Q9Y236 505 aa10.33□□□□□ -0.76
LSM2-214ENST00000493387 RP1L1Q8IWN7 2480 aaPredicted RBP10.33□□□□□ -0.76
LSM2-214ENST00000493387 KMT2BQ9UMN6 2715 aaPredicted RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 A0A1W2PNV4 684 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 MBD3L4A6NDZ8 208 aaPredicted RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 MBD3L3A6NE82 208 aaPredicted RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 MBD3L5A6NJ08 208 aaPredicted RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 SAC3D1A6NKF1 404 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 LRRN3E7EW58 273 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 SMAD9O15198 467 aaKnown RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 ZNHIT1O43257 154 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 GASTP01350 101 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 IL2RAP01589 272 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 CRHP06850 196 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 CBLP22681 906 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 SLC16A1P53985 500 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 LSM11P83369 360 aaKnown RBP eCLIP10.32□□□□□ -0.76
LSM2-214ENST00000493387 PUDPQ08623 228 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 RASGEF1BQ0VAM2 473 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 MRPL49Q13405 166 aaKnown RBP10.32□□□□□ -0.76
LSM2-214ENST00000493387 LAPTM4AQ15012 233 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 POU4F3Q15319 338 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 ABLIM2Q6H8Q1 611 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 RTL6Q6ICC9 239 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 FAHD1Q6P587 224 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 RPTNQ6XPR3 784 aa10.32□□□□□ -0.76
LSM2-214ENST00000493387 RASSF6Q6ZTQ3 369 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms