RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 DNAJA4Q8WW22 397 aaPredicted RBP10.91□□□□□ -0.66
COL6A1-205ENST00000492851 PROX1Q92786 737 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 VPS33AQ96AX1 596 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 C3orf49Q96BT1 292 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 C7orf26Q96N11 449 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF385AQ96PM9 386 aaKnown RBP10.91□□□□□ -0.66
COL6A1-205ENST00000492851 OR52B2Q96RD2 323 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 C1QTNF6Q9BXI9 259 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 CORO2BQ9UQ03 480 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 USH1CQ9Y6N9 552 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 HIVEP2P31629 2446 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 HEATR5AQ86XA9 2040 aa10.91□□□□□ -0.66
COL6A1-205ENST00000492851 NAV3Q8IVL0 2385 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 PRORSD1PA6NEY8 169 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ELOA3DA6NLF2 546 aaPredicted RBP10.9□□□□□ -0.66
COL6A1-205ENST00000492851 AKAP8O43823 692 aaKnown RBP10.9□□□□□ -0.66
COL6A1-205ENST00000492851 NDUFS7O75251 213 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 F12P00748 615 aaPredicted RBP10.9□□□□□ -0.66
COL6A1-205ENST00000492851 CRYAAP02489 173 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ZNF43P17038 809 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 EFNA4P52798 201 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.66
COL6A1-205ENST00000492851 LOXL1Q08397 574 aaPredicted RBP10.9□□□□□ -0.66
COL6A1-205ENST00000492851 BNIP2Q12982 314 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 MFSD13AQ14CX5 517 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ELOA3BQ3SY89 546 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 HMBOX1Q6NT76 420 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ANKRD16Q6P6B7 361 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 PODNL1Q6PEZ8 512 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 SERPINA11Q86U17 422 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 HIPK1Q86Z02 1210 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 CCDC36Q8IYA8 594 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 MAPK1IP1LQ8NDC0 245 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ELOA3Q8NG57 546 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 LRRC8CQ8TDW0 803 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ZBTB9Q96C00 473 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 CCDC28BQ9BUN5 200 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 KATNB1Q9BVA0 655 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 PAIP1Q9H074 479 aaKnown RBP10.9□□□□□ -0.66
COL6A1-205ENST00000492851 TCF7L2Q9NQB0 619 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 SELENONQ9NZV5 590 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 RCE1Q9Y256 329 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 GMEB1Q9Y692 573 aa10.9□□□□□ -0.66
COL6A1-205ENST00000492851 ARPC4-TTLL3A0A0A6YYG9 625 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 LOC102725191A0A1B0GVB3 256 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 A8MV72 311 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-205ENST00000492851 EVPLLA8MZ36 301 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 TMEM229AB2RXF0 380 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 AIM2O14862 343 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 FRS3O43559 492 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SERPINB7O75635 380 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 PRG2P13727 222 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 CDH2P19022 906 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-205ENST00000492851 P2RY4P51582 365 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 KRTAP1-1Q07627 177 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SPOCK1Q08629 439 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 RPS26P11Q5JNZ5 115 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-205ENST00000492851 BEND6Q5SZJ8 279 aaPredicted RBP10.89□□□□□ -0.67
COL6A1-205ENST00000492851 LRIF1Q5T3J3 769 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 AGBL2Q5U5Z8 902 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 FAM91A1Q658Y4 838 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 REEP3Q6NUK4 255 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 NIPAL3Q6P499 406 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 ULK3Q6PHR2 472 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SLC2A7Q6PXP3 512 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 BLOC1S3Q6QNY0 202 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 C6orf89Q6UWU4 347 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 MAVSQ7Z434 540 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 EPHX4Q8IUS5 362 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 IL17RDQ8NFM7 739 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 OR4F15Q8NGB8 312 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 OR9I1Q8NGQ6 314 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 OR1K1Q8NGR3 316 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SPATA3Q8NHX4 192 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 FAM168AQ92567 244 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SLC38A4Q969I6 547 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SLC25A36Q96CQ1 311 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 OXGR1Q96P68 337 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SLC38A2Q96QD8 506 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 TNFRSF13CQ96RJ3 184 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 ZNF607Q96SK3 696 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 RABEP2Q9H5N1 569 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 YAE1D1Q9NRH1 226 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 SLC13A4Q9UKG4 626 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 FKBP7Q9Y680 259 aa10.89□□□□□ -0.67
COL6A1-205ENST00000492851 IGHV4-30-2A0A087WSY4 118 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 KIAA1324LA8MWY0 1029 aaPredicted RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 B9A039 149 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 FTCDNL1E5RQL4 147 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 RPL36A-HNRNPH2H7BZ11 118 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 NDUFS8O00217 210 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 SLC43A1O75387 559 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 PDE5AO76074 875 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 VIMP08670 466 aaKnown RBP10.88□□□□□ -0.67
COL6A1-205ENST00000492851 ROS1P08922 2347 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 PTNP21246 168 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 SLC6A2P23975 617 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 SERPINF1P36955 418 aa10.88□□□□□ -0.67
COL6A1-205ENST00000492851 RPS5P46782 204 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms