RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 BST1Q10588 318 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 DUSP7Q16829 419 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 BCL7AQ4VC05 210 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 C2orf83Q53S99 150 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 CASC10Q5T4H9 136 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 C11orf71Q6IPW1 123 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 ZYG11AQ6WRX3 759 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 RUFY3Q7L099 469 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 GDPD3Q7L5L3 318 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 NBPF5PQ86XG9 351 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 TGIF2LXQ8IUE1 241 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 EGFL6Q8IUX8 553 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 FTMTQ8N4E7 242 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 OR4K14Q8NGD5 310 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 OR2AP1Q8NGE2 309 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 OR52H1Q8NGJ2 320 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 NEIL3Q8TAT5 605 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 RNF139Q8WU17 664 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 ANKRD49Q8WVL7 239 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 DCUN1D4Q92564 292 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 PAGE5Q96GU1 130 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 CNDP1Q96KN2 507 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 C12orf42Q96LP6 360 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 TCEANC2Q96MN5 208 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 OXGR1Q96P68 337 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 EBF4Q9BQW3 602 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 TCHPQ9BT92 498 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 SELENOIQ9C0D9 397 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 C20orf85Q9H1P6 137 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 NXF3Q9H4D5 531 aaKnown RBP1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 AZI2Q9H6S1 392 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 SUDS3Q9H7L9 328 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 FOLH1BQ9HBA9 442 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 SH2D2AQ9NP31 389 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 BFARQ9NZS9 450 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 SUN2Q9UH99 717 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 TMCO1Q9UM00 188 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 IFT52Q9Y366 437 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 NEUROG3Q9Y4Z2 214 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 CDC42BPBQ9Y5S2 1711 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 TTC21BQ7Z4L5 1316 aa1.91□□□□□ -2.1
HMGB1P30-201ENST00000492455 ARHGAP21Q5T5U3 1957 aa1.9□□□□□ -2.1
HMGB1P30-201ENST00000492455 LOC110117498-PIK3R3F6TDL0 507 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 GOLGA8SH3BPF8 625 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 AP3B1O00203 1094 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 HIP1O00291 1037 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 MBTPS2O43462 519 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SNAPINO95295 136 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 UQCRFS1P1P0C7P4 283 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SLC2A3P11169 496 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 RFC4P35249 363 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SSR1P43307 286 aaKnown RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 TPMTP51580 245 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 NUP107P57740 925 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CSNK1G2P78368 415 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 PLD1Q13393 1074 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 GK3PQ14409 553 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 OXA1LQ15070 435 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 DGUOKQ16854 277 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 IMMTQ16891 758 aaKnown RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 PARP15Q460N3 678 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 KCTD21Q4G0X4 260 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SAMD4BQ5PRF9 694 aaKnown RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CCDC183Q5T5S1 534 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 PRAMEF5Q5TYX0 476 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 C1orf146Q5VVC0 180 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 PRAMEF6Q5VXH4 476 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF530Q6P9A1 599 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 IGFL2Q6UWQ7 119 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 TAS2R42Q7RTR8 314 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CDR2LQ86X02 465 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SLC22A9Q8IVM8 553 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CCDC65Q8IXS2 484 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF100Q8IYN0 542 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 UBE2J2Q8N2K1 259 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 NECAB1Q8N987 351 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF740Q8NDX6 193 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 OR10G3Q8NGC4 313 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 AKR7LQ8NHP1 331 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 BRSK1Q8TDC3 778 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 DNAJA4Q8WW22 397 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 FGF11Q92914 225 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 TUBGCP3Q96CW5 907 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CXorf40BQ96DE9 158 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 TMEM101Q96IK0 257 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 TPD52L3Q96J77 140 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SLC35E1Q96K37 410 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF641Q96N77 438 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 KCNA7Q96RP8 456 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 HIST1H4GQ99525 98 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 MRPL45Q9BRJ2 306 aaKnown RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CHRDL1Q9BU40 450 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 ANKRD19PQ9H560 264 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 NIPAL2Q9H841 368 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 NMRAL1Q9HBL8 299 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 NMRK1Q9NWW6 199 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 DCAF16Q9NXF7 216 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 THUMPD1Q9NXG2 353 aaKnown RBP1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 HOXC10Q9NYD6 342 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 TREM2Q9NZC2 230 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms