RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 TMEM45BQ96B21 275 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 ROPN1LQ96C74 230 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 DDIT4LQ96D03 193 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 TRNT1Q96Q11 434 aaKnown RBP8.03□□□□□ -1.12
HDAC3-212ENST00000492407 INPP5KQ9BT40 448 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 MECRQ9BV79 373 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 SF3B5Q9BWJ5 86 aaKnown RBP8.03□□□□□ -1.12
HDAC3-212ENST00000492407 DPY30Q9C005 99 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 QRSL1Q9H0R6 528 aaKnown RBP8.03□□□□□ -1.12
HDAC3-212ENST00000492407 OR51I1Q9H343 314 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 MTHFD2LQ9H903 347 aaPredicted RBP8.03□□□□□ -1.12
HDAC3-212ENST00000492407 SSU72Q9NP77 194 aaKnown RBP8.03□□□□□ -1.12
HDAC3-212ENST00000492407 OBP2BQ9NPH6 170 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 CTPS2Q9NRF8 586 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 NPAP1Q9NZP6 1156 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 BTNL2Q9UIR0 455 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 SLC9A8Q9Y2E8 581 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 PMF1-BGLAPU3KQ54 211 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 USF3Q68DE3 2245 aa8.03□□□□□ -1.12
HDAC3-212ENST00000492407 A0A096LNT2 108 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 AGAP5A6NIR3 686 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 C9JVG2 144 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 NDUFS8O00217 210 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 PSMD9O00233 223 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 SSX4O60224 188 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 RAD51DO75771 328 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 SERPINE1P05121 402 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 OR12D1P0DN82 309 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CFL1P23528 166 aaKnown RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 EDNRAP25101 427 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 APOBEC3AP31941 199 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 SOX6P35712 828 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 SLC1A3P43003 542 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 KHKP50053 298 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 FABP6P51161 128 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 POLR2HP52434 150 aaKnown RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 EFNA4P52798 201 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 RPS26P62854 115 aaKnown RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 S100A12P80511 92 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 HPCAP84074 193 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 BLMHQ13867 455 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CYLC2Q14093 348 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CASP8Q14790 479 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 SLC17A1Q14916 467 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 MAPK14Q16539 360 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 TMEM249Q2WGJ8 235 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 Q3ZCU0 254 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 SIGIRRQ6IA17 410 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 FRRS1Q6ZNA5 592 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 ZCCHC23Q6ZST2 131 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 ABHD12BQ7Z5M8 362 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 NUDCD3Q8IVD9 361 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF440Q8IYI8 595 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CLECL1Q8IZS7 167 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CADM3Q8N126 398 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 LSMEM1Q8N8F7 131 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 MAPK1IP1LQ8NDC0 245 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 OR2W6PQ8NHA6 318 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 ENKURQ8TC29 256 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 AGR3Q8TD06 166 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF775Q96BV0 537 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CCDC115Q96NT0 180 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF317Q96PQ6 595 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 COQ7Q99807 217 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 REPIN1Q9BWE0 567 aaKnown RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 CACNG6Q9BXT2 260 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 NUF2Q9BZD4 464 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 AKTIPQ9H8T0 292 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 MYOZ1Q9NP98 299 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 HAO1Q9UJM8 370 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 GDF2Q9UK05 429 aaPredicted RBP8.02□□□□□ -1.13
HDAC3-212ENST00000492407 POU2F3Q9UKI9 436 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 RAP2CQ9Y3L5 183 aa8.02□□□□□ -1.13
HDAC3-212ENST00000492407 STAB1Q9NY15 2570 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 IGHV4-30-2A0A087WSY4 118 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 CENPVL1A0A0U1RR11 272 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 RNF212BA8MTL3 300 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 PIP5K1CO60331 668 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 PFDN1O60925 122 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 NDUFS7O75251 213 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 SPAG7O75391 227 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 VAMP5O95183 116 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 TGDSO95455 350 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 SCGB1D2O95969 90 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 WNT11O96014 354 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 F12P00748 615 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 DBIP07108 87 aaKnown RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 ITGA5P08648 1049 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 LBPP18428 481 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 MPGP29372 298 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 IDH2P48735 452 aaKnown RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 RPL14P50914 215 aaKnown RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 ZNF83P51522 516 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 CASP9P55211 416 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 OR2B6P58173 313 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 PRPS1P60891 318 aa8.01□□□□□ -1.13
HDAC3-212ENST00000492407 ABCE1P61221 599 aaKnown RBP8.01□□□□□ -1.13
HDAC3-212ENST00000492407 PHC1P78364 1004 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms