RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CLEC9AQ6UXN8 241 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 PTOV1Q86YD1 416 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 ARMC8Q8IUR7 673 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 KDM8Q8N371 416 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 DPP10Q8N608 796 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 LSMEM1Q8N8F7 131 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 POMGNT2Q8NAT1 580 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 MFSD8Q8NHS3 518 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 RNF217Q8TC41 542 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 GTPBP3Q969Y2 492 aaKnown RBP13.17□□□□□ -0.3
TOM1-215ENST00000491987 COX4I2Q96KJ9 171 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 ANKRD27Q96NW4 1050 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 CGREF1Q99674 301 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 C1QTNF6Q9BXI9 259 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 TMEM120AQ9BXJ8 343 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 AMBRA1Q9C0C7 1298 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 C12orf10Q9HB07 376 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 SLC17A5Q9NRA2 495 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 CISD1Q9NZ45 108 aaKnown RBP13.17□□□□□ -0.3
TOM1-215ENST00000491987 SEC14L4Q9UDX3 406 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 TESQ9UGI8 421 aaKnown RBP13.17□□□□□ -0.3
TOM1-215ENST00000491987 SLC13A4Q9UKG4 626 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 ANGPT4Q9Y264 503 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 RASD1Q9Y272 281 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 NF1P21359 2839 aa13.17□□□□□ -0.3
TOM1-215ENST00000491987 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
TOM1-215ENST00000491987 IGKV1D-42A0A075B6H8 117 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 SERPINB7O75635 380 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 KRT33AO76009 404 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 CDH2P19022 906 aaPredicted RBP13.16□□□□□ -0.3
TOM1-215ENST00000491987 PTAFRP25105 342 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 MPGP29372 298 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 SELENOPP49908 381 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 TGFBR3Q03167 851 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 LGALS3BPQ08380 585 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 PGGHGQ32M88 737 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 NIPAL3Q6P499 406 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 KLHL17Q6TDP4 642 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 CREB3L2Q70SY1 520 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 EPHX4Q8IUS5 362 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 WDR31Q8NA23 367 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 SMYD1Q8NB12 490 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 C11orf65Q8NCR3 313 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 C1orf162Q8NEQ5 155 aaPredicted RBP13.16□□□□□ -0.3
TOM1-215ENST00000491987 SLC38A4Q969I6 547 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 TAAR8Q969N4 342 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 POM121Q96HA1 1249 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 WFDC6Q9BQY6 131 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 BDH2Q9BUT1 245 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 PIF1Q9H611 641 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 AMDHD2Q9Y303 409 aa13.16□□□□□ -0.3
TOM1-215ENST00000491987 ROS1P08922 2347 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 M0R082 166 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 OVOL3O00110 214 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 MFN2O95140 757 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 OPN1SWP03999 348 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 PTNP21246 168 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 CBLP22681 906 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 CD40P25942 277 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 PCBP3P57721 371 aaKnown RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 DMTNQ08495 405 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 RBBP4Q09028 425 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 SF3A3Q12874 501 aaKnown RBP eCLIP13.15□□□□□ -0.3
TOM1-215ENST00000491987 OR1Q1Q15612 314 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 HIKESHIQ53FT3 197 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 FAM69AQ5T7M9 428 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 FAM91A1Q658Y4 838 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 ULK3Q6PHR2 472 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 ABHD12BQ7Z5M8 362 aaPredicted RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 BHLHE22Q8NFJ8 381 aaPredicted RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 ZNF417Q8TAU3 575 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 TSPEARQ8WU66 669 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 DNAJA4Q8WW22 397 aaPredicted RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 SLC47A1Q96FL8 570 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 RADILQ96JH8 1075 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 ALKBH3Q96Q83 286 aaPredicted RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 ZNF587Q96SQ5 575 aaPredicted RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 TRAF4Q9BUZ4 470 aaPredicted RBP13.15□□□□□ -0.3
TOM1-215ENST00000491987 ALG2Q9H553 416 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 SELENONQ9NZV5 590 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 POU2F3Q9UKI9 436 aa13.15□□□□□ -0.3
TOM1-215ENST00000491987 TRAV36DV7A0A075B6V5 113 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 E7EQL1 145 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 ZNF587BE7ETH6 402 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 M0R3H8 397 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 AIM2O14862 343 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 OR2T1O43869 369 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 TPST2O60704 377 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 LY6G6DO95868 133 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 LGI1O95970 557 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 TROVE2P10155 538 aaKnown RBP eCLIP13.14□□□□□ -0.31
TOM1-215ENST00000491987 ZNF43P17038 809 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 HOXB4P17483 251 aaPredicted RBP13.14□□□□□ -0.31
TOM1-215ENST00000491987 GRPRP30550 384 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 CLDN17P56750 224 aa13.14□□□□□ -0.31
TOM1-215ENST00000491987 IL1RL1Q01638 556 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms