RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 KITP10721 976 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 GPX2P18283 190 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 CRATP43155 626 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF83P51522 516 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 DSCR9P59020 149 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 PRPS1P60891 318 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 BNIP2Q12982 314 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 VEZF1Q14119 521 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 OR7A5Q15622 319 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 CASP12Q6UXS9 341 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 LINGO2Q7L985 606 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 AAED1Q7RTV5 226 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 SERPINA11Q86U17 422 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 COMTD1Q86VU5 262 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 HIPK1Q86Z02 1210 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 MIER2Q8N344 545 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 MUC15Q8N387 334 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 STON2Q8WXE9 905 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 BCL2L2Q92843 193 aaPredicted RBP7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 ZBTB9Q96C00 473 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 DNAJA3Q96EY1 480 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 ADAD1Q96M93 576 aaKnown RBP7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 NELFAQ9H3P2 528 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 ARMC7Q9H6L4 198 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 NKIRAS1Q9NYS0 192 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 B3GAT1Q9P2W7 334 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 RASD1Q9Y272 281 aa7.32□□□□□ -1.24
SMARCB1-207ENST00000491967 IGHV4-30-2A0A087WSY4 118 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 A0A1W2PR80 420 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 ERLIN1O75477 346 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 ARAFP10398 606 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 HTR2AP28223 471 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 PRKAR1BP31321 381 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 APOBEC3AP31941 199 aaPredicted RBP7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 IDH3AP50213 366 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 COPZ1P61923 177 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 PPP2R2BQ00005 443 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 LOXL1Q08397 574 aaPredicted RBP7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 DMTNQ08495 405 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 ADRM1Q16186 407 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 RPS26P11Q5JNZ5 115 aaPredicted RBP7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 AGBL2Q5U5Z8 902 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 NXNQ6DKJ4 435 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 TMEM225Q6GV28 225 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 DHRS4L2Q6PKH6 230 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC2A7Q6PXP3 512 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC22A25Q6T423 547 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 DLEU7Q6UYE1 221 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 ABHD12BQ7Z5M8 362 aaPredicted RBP7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 FBXL14Q8N1E6 418 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 DEPDC4Q8N2C3 294 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 C10orf111Q8N326 155 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 MAPK1IP1LQ8NDC0 245 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 OR1K1Q8NGR3 316 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 OR6S1Q8NH40 331 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 SPATA3Q8NHX4 192 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 BBS10Q8TAM1 723 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 MGARPQ8TDB4 240 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 MAL2Q969L2 176 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 KTI12Q96EK9 354 aaPredicted RBP7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 SLC41A3Q96GZ6 507 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 HS6ST2Q96MM7 605 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 CCDC28BQ9BUN5 200 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 CACNG6Q9BXT2 260 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 RAD21L1Q9H4I0 556 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 ALG2Q9H553 416 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 FKRPQ9H9S5 495 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 SLAMF8Q9P0V8 285 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 UPB1Q9UBR1 384 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 RCE1Q9Y256 329 aa7.31□□□□□ -1.24
SMARCB1-207ENST00000491967 IGKV1D-42A0A075B6H8 117 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 VWC2LB2RUY7 222 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 M0R1B8 84 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 OR2T1O43869 369 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TPST2O60704 377 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ANP32DO95626 131 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 WNT11O96014 354 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 F12P00748 615 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 IGKV3-15P01624 115 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 PNMTP11086 282 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 PTNP21246 168 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 SELENOPP49908 381 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 FABP6P51161 128 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ATP4BP51164 291 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 EFNA4P52798 201 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 VLDLRP98155 873 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 LGALS3BPQ08380 585 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 TBRG1Q3YBR2 411 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 HIKESHIQ53FT3 197 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF311Q5JNZ3 666 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 C9orf135Q5VTT2 229 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ANKRD16Q6P6B7 361 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 C5orf46Q6UWT4 87 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 LINC00114Q6XXX2 140 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ZNF627Q7L945 461 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 NET1Q7Z628 596 aaPredicted RBP7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 CADM2Q8N3J6 435 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 GOLGA6L1Q8N7Z2 621 aa7.3□□□□□ -1.24
SMARCB1-207ENST00000491967 ADPRHL1Q8NDY3 354 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms