RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 ZCCHC18P0CG32 403 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF16P17020 682 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-211ENST00000491581 AQP5P55064 265 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 CLDN17P56750 224 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 HNRNPA0Q13151 305 aaKnown RBP7.76□□□□□ -1.17
HDAC3-211ENST00000491581 MSMPQ1L6U9 139 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 TBRG1Q3YBR2 411 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 LIN52Q52LA3 116 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 PRAMEF8Q5VWM4 474 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 PRAMEF7Q5VXH5 474 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 TMEM225Q6GV28 225 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 WBP2NLQ6ICG8 309 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 RBM45Q8IUH3 476 aaKnown RBP7.76□□□□□ -1.17
HDAC3-211ENST00000491581 CMIPQ8IY22 773 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 OR4D11Q8NGI4 311 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 OR1K1Q8NGR3 316 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 ITCHQ96J02 903 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 MOGAT1Q96PD6 335 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-211ENST00000491581 DHRS9Q9BPW9 319 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 NAA11Q9BSU3 229 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-211ENST00000491581 SPATA9Q9BWV2 254 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 CBLN4Q9NTU7 201 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 NKIRAS1Q9NYS0 192 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 ZIM2Q9NZV7 527 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 USP22Q9UPT9 525 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 SLC9A8Q9Y2E8 581 aa7.76□□□□□ -1.17
HDAC3-211ENST00000491581 TRBV5-3A0A0A0MS03 114 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 A0A1B0GWA3 101 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 SLC35F4A4IF30 521 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 A8MVM7 634 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 FAM171A2A8MVW0 826 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 LYNX1G3V0Z9 82 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 M0R3H8 397 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 FAAHO00519 579 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 CD5LO43866 347 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 SERPINI2O75830 405 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 GPIP06744 558 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 IGFBP1P08833 259 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 CECR9P0C854 216 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 LYNX1P0DP58 116 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 PTAFRP25105 342 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 MPGP29372 298 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 GRPRP30550 384 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 RBMXP38159 391 aaKnown RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 HTR3AP46098 478 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 CLK1P49759 484 aaKnown RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 CRISP3P54108 245 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 ARF1P84077 181 aaKnown RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 ROR2Q01974 943 aaKnown RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 HGFACQ04756 655 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 ADRM1Q16186 407 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 CARTPTQ16568 116 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 RNF220Q5VTB9 566 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 AGAP6Q5VW22 663 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 WDR88Q6ZMY6 472 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 RETREG3Q86VR2 466 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 FBXL14Q8N1E6 418 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 SMYD1Q8NB12 490 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 GLB1L3Q8NCI6 653 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 OR10H5Q8NGA6 315 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 BCL2L2Q92843 193 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-211ENST00000491581 TMEM45BQ96B21 275 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 TXNDC15Q96J42 360 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 PIF1Q9H611 641 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 A4GALTQ9NPC4 353 aa7.75□□□□□ -1.17
HDAC3-211ENST00000491581 CSPG4Q6UVK1 2322 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 A0A096LPI6 279 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 A0A0G2JPF8 293 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 SH3PXD2BA1X283 911 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 HNRNPCL2B2RXH8 293 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 HNRNPCL3B7ZW38 293 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 MS4A18H0YCH9 400 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 DNPH1O43598 174 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 EIF1BO60739 113 aaKnown RBP7.74□□□□□ -1.17
HDAC3-211ENST00000491581 HNRNPCL1O60812 293 aaKnown RBP7.74□□□□□ -1.17
HDAC3-211ENST00000491581 KRT33AO76009 404 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 THY1P04216 161 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 PATE4P0C8F1 98 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 HNRNPCL4P0DMR1 293 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 IGHV4-31P0DP07 118 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 ARAFP10398 606 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 TNFRSF1BP20333 461 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 FUT4P22083 530 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 IL2RGP31785 369 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 IDH3GP51553 393 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-211ENST00000491581 MTPNP58546 118 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 IL1RL1Q01638 556 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 PIGFQ07326 219 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 RAB35Q15286 201 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 NPTX1Q15818 432 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 GSTA3Q16772 222 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 SWI5Q1ZZU3 235 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 TMEM249Q2WGJ8 235 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 MS4A18Q3C1V0 323 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 AGKQ53H12 422 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 C6orf52Q5T4I8 152 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 HMBOX1Q6NT76 420 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms