RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	LUZP2	Q86TE4	346 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ATG4D	Q86TL0	474 aa	Predicted RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ZBTB46	Q86UZ6	589 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	COMTD1	Q86VU5	262 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	UBALD2	Q8IYN6	164 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	D2HGDH	Q8N465	521 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	FAM109A	Q8N4B1	249 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	TOMM5	Q8N4H5	51 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	LRRC17	Q8N6Y2	441 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	OR5T3	Q8NGG3	340 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	OR1N1	Q8NGS0	311 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	OR13C2	Q8NGS9	318 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	PHOSPHO1	Q8TCT1	267 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	GRHL3	Q8TE85	626 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	METTL21A	Q8WXB1	218 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ST8SIA1	Q92185	356 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	TTC9	Q92623	222 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	GHSR	Q92847	366 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	PHF21A	Q96BD5	680 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ARSG	Q96EG1	525 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	MED30	Q96HR3	178 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SLC41A2	Q96JW4	573 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	C4orf36	Q96KX1	117 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	HYLS1	Q96M11	299 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	THAP7	Q9BT49	309 aa	Predicted RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	TBL1XR1	Q9BZK7	514 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	NMNAT2	Q9BZQ4	307 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SLC7A5P2	Q9GIP4	190 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	HDHD2	Q9H0R4	259 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	DUSP15	Q9H1R2	295 aa	Predicted RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SLCO5A1	Q9H2Y9	848 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	DPAGT1	Q9H3H5	408 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	LRRN3	Q9H3W5	708 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	NEK6	Q9HC98	313 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	MCCC2	Q9HCC0	563 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	TCF7L1	Q9HCS4	588 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	TIGAR	Q9NQ88	270 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SLC17A5	Q9NRA2	495 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SERINC1	Q9NRX5	453 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	DDX28	Q9NUL7	540 aa	Known RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	QPCTL	Q9NXS2	382 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	LRIT1	Q9P2V4	623 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	EXTL2	Q9UBQ6	330 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	CKLF	Q9UBR5	152 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	PISD	Q9UG56	409 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	MUTYH	Q9UIF7	546 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	KCNE5	Q9UJ90	142 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	NDRG2	Q9UN36	371 aa	Known RBP	5.8	□□□□□ -1.48
FN1-223	ENST00000490833	SLC6A14	Q9UN76	642 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	ERVK-19	Q9WJR5	959 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	IER3IP1	Q9Y5U9	82 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	FKBP7	Q9Y680	259 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	CENPF	P49454	3210 aa		5.8	□□□□□ -1.48
FN1-223	ENST00000490833	NIN	Q8N4C6	2090 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833		A0A1B0GVI7	797 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833		A0A1W2PRG6	482 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	TCRBV16S1A1N1	A0A5B0	115 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF860	A6NHJ4	632 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	FAM47E-STBD1	D6RA91	191 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	INMT-MINDY4	F8WBC2	141 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833		H3BQ06	376 aa	Predicted RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	BOLA2-SMG1P6	H3BVE0	249 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	AIP	O00170	330 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	SOCS6	O14544	535 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	MBTPS2	O43462	519 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	CPNE3	O75131	537 aa	Known RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	PPP1R3D	O95685	299 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ONECUT2	O95948	504 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	STATH	P02808	62 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	CD2	P06729	351 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	CT62	P0C5K7	136 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ANKRD34C	P0C6C1	535 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ASAH2B	P0C7U1	165 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	PVR	P15151	417 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	HIST1H1C	P16403	213 aa	Known RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	SPI1	P17947	270 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	AHCY	P23526	432 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	CFP	P27918	469 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	SLC6A1	P30531	599 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	GABRA4	P48169	554 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	FNTB	P49356	437 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	GDI2	P50395	445 aa	Known RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	DUSP3	P51452	185 aa	Predicted RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	P2RX1	P51575	399 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	PGD	P52209	483 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	CLDN20	P56880	219 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	HOXC5	Q00444	222 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	CSTF1	Q05048	431 aa	Known RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	DLX2	Q07687	328 aa	Predicted RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	NSDHL	Q15738	373 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	SMAD2	Q15796	467 aa	Known RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	KCNJ8	Q15842	424 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF79	Q15937	498 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF74	Q16587	644 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833		Q499Y3	187 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	SOWAHC	Q53LP3	525 aa	Predicted RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF362	Q5T0B9	420 aa	Predicted RBP	5.79	□□□□□ -1.48
FN1-223	ENST00000490833	FAAH2	Q6GMR7	532 aa		5.79	□□□□□ -1.48
FN1-223	ENST00000490833	FDX2	Q6P4F2	183 aa		5.79	□□□□□ -1.48

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