RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 KCTD11Q693B1 232 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 BPIFB2Q8N4F0 458 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 IQCF1Q8N6M8 205 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 CHST14Q8NCH0 376 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 K7EQM0 130 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 TAAR5O14804 337 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 MAP2K6P52564 334 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 SIRPAP78324 504 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 ZMAT1Q5H9K5 638 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 FAM162BQ5T6X4 162 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 FAM71F1Q96KD3 344 aaPredicted RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 SYNPO2LQ9H987 977 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 LHX3Q9UBR4 397 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 KCND3Q9UK17 655 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 DIMT1Q9UNQ2 313 aaKnown RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 MCM3APO60318 1980 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 FAM227AF5H4B4 570 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 LCMT2O60294 686 aaKnown RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 CALCBP10092 127 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 GIFP27352 417 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 IL2RGP31785 369 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 DCDP81605 110 aaKnown RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 GALEQ14376 348 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 TP53I3Q53FA7 332 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 ZNF296Q8WUU4 475 aaPredicted RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 GIMAP1Q8WWP7 306 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 CPPED1Q9BRF8 314 aaPredicted RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 USP36Q9P275 1121 aaKnown RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 SIPA1L3O60292 1781 aaPredicted RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 ARRDC5A6NEK1 342 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 LRRC30A6NM36 301 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 AP1G1O43747 822 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 ZNF254O75437 659 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 FURINP09958 794 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 FPR3P25089 353 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 CTSL3PQ5NE16 218 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 C3orf49Q96BT1 292 aa8.24□□□□□ -1.09
LSAMP-205ENST00000490035 SIDT1Q9NXL6 827 aaKnown RBP8.24□□□□□ -1.09
LSAMP-205ENST00000490035 TARM1B6A8C7 271 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 K7ERQ8 282 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 MRPL33O75394 65 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 REEP5Q00765 189 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 NDUFAF7Q7L592 441 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 ZFP41Q8N8Y5 198 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 CHTF18Q8WVB6 975 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 EIF4E2O60573 245 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 IMPA1P29218 277 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 GRPRP30550 384 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TNFSF8P32971 234 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SFTPDP35247 375 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 EEF1A1P68104 462 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 ALKAL1Q6UXT8 129 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 FRZBQ92765 325 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SLC39A13Q96H72 371 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 LCORQ96JN0 433 aaPredicted RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 USB1Q9BQ65 265 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 VN1R3Q9BXE9 311 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TUBGCP6Q96RT7 1819 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 T-ENOLP0DO92 83 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 HTR2CP28335 458 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 CD79BP40259 229 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SSR4P51571 173 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 PITX1P78337 314 aaPredicted RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 PIWIL3Q7Z3Z3 882 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TOMM40LQ969M1 308 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TECTBQ96PL2 329 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 RTP3Q9BQQ7 232 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 NIPSNAP3BQ9BS92 247 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 PATZ1Q9HBE1 687 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SLC35E2P0CK97 266 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 PTGER4P35408 488 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TM4SF4P48230 202 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 LCN6P62502 163 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SLC5A12Q1EHB4 618 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 ZNF628Q5EBL2 1059 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SYT6Q5T7P8 510 aaPredicted RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SLC51BQ86UW2 128 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SDR9C7Q8NEX9 313 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 BCAS3Q9H6U6 928 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 PGAP2Q9UHJ9 254 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 PTRH2Q9Y3E5 179 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TRBV11-1A0A0K0K1C0 115 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 LOC100289279A0A1B0GTE1 492 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 VAMP5O95183 116 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 CLDN6P56747 220 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TMEM178AQ8NBL3 297 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 GJC3Q8NFK1 279 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 LAMP3Q9UQV4 416 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 RHBDD3Q9Y3P4 386 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 KIAA0100Q14667 2235 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TLCD2A6NGC4 264 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 TNFRSF10CO14798 259 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SLC16A7O60669 478 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 MDGA1Q8NFP4 955 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 BADQ92934 168 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 HHIPL1Q96JK4 782 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 WDR83Q9BRX9 315 aaKnown RBP8.23□□□□□ -1.09
LSAMP-205ENST00000490035 HINT2Q9BX68 163 aa8.23□□□□□ -1.09
LSAMP-205ENST00000490035 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms