RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 COPZ1P61923 177 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 TGFBR3Q03167 851 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 MST1LQ2TV78 715 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ZNF311Q5JNZ3 666 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 PRAMEF8Q5VWM4 474 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 PRAMEF7Q5VXH5 474 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 TMEM225Q6GV28 225 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 ZNF544Q6NX49 715 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 FBXL14Q8N1E6 418 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 POMGNT2Q8NAT1 580 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 STK35Q8TDR2 534 aa16.96■□□□□ 0.31
TNFRSF1B-202ENST00000489921 A0A096LPI6 279 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 H7C417 338 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 CD5LO43866 347 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NCF2P19878 526 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 LRIF1Q5T3J3 769 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 C1QTNF12Q5T7M4 302 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 MFSD8Q8NHS3 518 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SLC35B4Q969S0 331 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 KTI12Q96EK9 354 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ADAD1Q96M93 576 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 C7orf26Q96N11 449 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 EBF4Q9BQW3 602 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SLCO1B3Q9NPD5 702 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SEC14L4Q9UDX3 406 aa16.95■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ATP6V1G2-DDX39BF2Z307 99 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ZNF432O94892 652 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 VAMP5O95183 116 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 LGI1O95970 557 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 CDH2P19022 906 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 IDH3AP50213 366 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NUDT6P53370 316 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 PRPS1P60891 318 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 FADDQ13158 208 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 PAGE3Q5JUK9 113 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 BLOC1S3Q6QNY0 202 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 DEPDC4Q8N2C3 294 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 KDM8Q8N371 416 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 OR1K1Q8NGR3 316 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 BBS10Q8TAM1 723 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 BCL2L2Q92843 193 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 RHNO1Q9BSD3 238 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TAPBPLQ9BX59 468 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NELFAQ9H3P2 528 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 B3GAT1Q9P2W7 334 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 MOKQ9UQ07 419 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 GMEB1Q9Y692 573 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ATP23Q9Y6H3 246 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 RTTNQ86VV8 2226 aa16.94■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TRBV5-3A0A0A0MS03 114 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 IGHV1-18A0A0C4DH31 117 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ELOA3DA6NLF2 546 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 UPK3AO75631 287 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TGDSO95455 350 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 PNMTP11086 282 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 HTR2AP28223 471 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 APOBEC3AP31941 199 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 RPS5P46782 204 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 RAB35Q15286 201 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SWI5Q1ZZU3 235 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ELOA3BQ3SY89 546 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TBRG1Q3YBR2 411 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 AGBL2Q5U5Z8 902 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 C6orf89Q6UWU4 347 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ZNF525Q8N782 197 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ELOA3Q8NG57 546 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NANOS1Q8WY41 292 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 PRR14Q9BWN1 585 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 IKZF5Q9H5V7 419 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ARMC7Q9H6L4 198 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 FKRPQ9H9S5 495 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TCF7L2Q9NQB0 619 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 VAPAQ9P0L0 249 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 RASD1Q9Y272 281 aa16.93■□□□□ 0.3
TNFRSF1B-202ENST00000489921 FBN3Q75N90 2809 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 IGKV1D-42A0A075B6H8 117 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TMEM247A6NEH6 219 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NR5A2O00482 541 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TLX2O43763 284 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TPST1O60507 370 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 WNT11O96014 354 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ARAFP10398 606 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ETS2P15036 469 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 PRKAR1BP31321 381 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NIPAL3Q6P499 406 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 LSMEM1Q8N8F7 131 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 NFKBIDQ8NI38 313 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TAAR8Q969N4 342 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SLC25A36Q96CQ1 311 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ALKBH3Q96Q83 286 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 WFDC6Q9BQY6 131 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 LINC00470Q9BZP3 86 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 RAD21L1Q9H4I0 556 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TMEM45AQ9NWC5 275 aa16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 CRNNQ9UBG3 495 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ERLIN1O75477 346 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 LY6HO94772 140 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 AHSA1O95433 338 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ADRM1Q16186 407 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms