RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 F8VZ95 297 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 EPHB6O15197 1021 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 HDAC3O15379 428 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 B4GALT5O43286 388 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 GPAA1O43292 621 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TPST2O60704 377 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CTSVO60911 334 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ENTPD5O75356 428 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 LCA5LO95447 670 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ANGPTL1O95841 491 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OXTP01178 125 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 PLEKP08567 350 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 MBL2P11226 248 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CDH1P12830 882 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ACADSP16219 412 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TCN1P20061 433 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 EFNA1P20827 205 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC1A4P43007 532 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CRYBB2P43320 205 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CCNHP51946 323 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CCNG1P51959 295 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CRIP2P52943 208 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CRISP1P54107 249 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 DCDC1P59894 354 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 UBE2G2P60604 165 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 LCN2P80188 198 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 RGS1Q08116 209 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CCDC173Q0VFZ6 552 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 RIGQ13278 110 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ITGB3BPQ13352 177 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 PIGHQ14442 188 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC17A1Q14916 467 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ANGPT1Q15389 498 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 UNC50Q53HI1 259 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CEP85LQ5SZL2 805 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 FAM120AOSQ5T036 256 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 C3P1Q6ZMU1 363 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 HSD11B1LQ7Z5J1 315 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TSEN54Q7Z6J9 526 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SFR1Q86XK3 245 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 LRRC49Q8IUZ0 686 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF100Q8IYN0 542 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ELMOD1Q8N336 334 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CEP112Q8N8E3 955 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 FBXO36Q8NEA4 188 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 B3GNT7Q8NFL0 401 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR4D9Q8NGE8 314 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR5T3Q8NGG3 340 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 OR56A4Q8NGH8 313 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CA5BP1Q8WTZ4 195 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 SCRN2Q96FV2 425 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 ABHD8Q96I13 439 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 UQCC2Q9BRT2 126 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 POTEKPQ9BYX7 375 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 COMMD4Q9H0A8 199 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 WDR55Q9H6Y2 383 aaPredicted RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 VIPAS39Q9H9C1 493 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 CSNK1G1Q9HCP0 422 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 DUS2Q9NX74 493 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 STMN3Q9NZ72 180 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 MYEF2Q9P2K5 600 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 TRMT112Q9UI30 125 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 PURGQ9UJV8 347 aaKnown RBP2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 VDAC3Q9Y277 283 aa2.68□□□□□ -1.98
DEPDC1-204ENST00000489862 DDX60Q8IY21 1712 aaKnown RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 LAMB2P55268 1798 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 A0A0A6YYD4 124 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 NPIPA5A0A0B4J1W7 369 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 LRIT2A6NDA9 550 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 VSTM2BA6NLU5 285 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF724A8MTY0 619 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 VGLL3A8MV65 326 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ARHGEF33A8MVX0 844 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 NPIPA5E9PKD4 350 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 K7ERI5 159 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 SNAI2O43623 268 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 FCN3O75636 299 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ATP5LO75964 103 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 LRATO95237 230 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 SBF1O95248 1867 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CLDN9O95484 217 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 JCHAINP01591 159 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 PCCAP05165 728 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GPIP06744 558 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CFC1BP0CG36 223 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CFC1P0CG37 223 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF26P17031 533 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CD82P27701 267 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GCAP28676 217 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 IL12BP29460 328 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GNA11P29992 359 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 SOX3P41225 446 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 OR3A2P47893 321 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 CSRP3P50461 194 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM50BP56557 158 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 GSCP56915 257 aaPredicted RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 OR2B6P58173 313 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 RPS27AP62979 156 aaKnown RBP2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 ERVK-25P63136 954 aa2.67□□□□□ -1.98
DEPDC1-204ENST00000489862 UBE2IP63279 158 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms