RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CNIH3Q8TBE1 160 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 SNRNP27Q8WVK2 155 aaKnown RBP12.75□□□□□ -0.37
VPS26A-205ENST00000489656 HIST1H2ACQ93077 130 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 UBE2FQ969M7 185 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 ARL5BQ96KC2 179 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 UBL7Q96S82 380 aaPredicted RBP12.75□□□□□ -0.37
VPS26A-205ENST00000489656 IFT27Q9BW83 186 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 FANCFQ9NPI8 374 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 NRIP3Q9NQ35 241 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 KLHL1Q9NR64 748 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 PLCXD1Q9NUJ7 323 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 ALKBH4Q9NXW9 302 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 TVP23BQ9NYZ1 205 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 TRAPPC4Q9Y296 219 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 CFAP47Q6ZTR5 3102 aa12.75□□□□□ -0.37
VPS26A-205ENST00000489656 ANKRD11Q6UB99 2663 aaPredicted RBP12.75□□□□□ -0.37
VPS26A-205ENST00000489656 DMXL2Q8TDJ6 3036 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 SH3D21A4FU49 640 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 GJE1A6NN92 205 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 MCIDASD6RGH6 385 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 H3BML4 177 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 SLC1A7O00341 560 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 IMPA2O14732 288 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 PRKYO43930 277 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 TFPIP10646 304 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 PEPDP12955 493 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 CRHBPP24387 322 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 GFRA1P56159 465 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 TMPRSS3P57727 454 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 GABARAPL2P60520 117 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 RPL18Q07020 188 aaKnown RBP12.74□□□□□ -0.37
VPS26A-205ENST00000489656 ZP4Q12836 540 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 MYBPHQ13203 477 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 OCLNQ16625 522 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 MEDAGQ5VYS4 303 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 SLC6A19Q695T7 634 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 ARHGAP11AQ6P4F7 1023 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 BORAQ6PGQ7 559 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 SLC22A16Q86VW1 577 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 OR14L1PQ8NHC6 308 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 TMEM163Q8TC26 289 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 MIB2Q96AX9 1013 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 Q96MT0 163 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 ASPNQ9BXN1 380 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 FN3KQ9H479 309 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 CMC2Q9NRP2 79 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 RASSF1Q9NS23 344 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 IL20RAQ9UHF4 553 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
VPS26A-205ENST00000489656 RPH3AQ9Y2J0 694 aaPredicted RBP12.74□□□□□ -0.37
VPS26A-205ENST00000489656 BLOC1S5-TXNDC5H3BN57 136 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 M0R082 166 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ACOT7O00154 380 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 PLPP3O14495 311 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 DNPH1O43598 174 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 PPP1R3DO95685 299 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 PMS2P2O95744 297 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 TXNDC12O95881 172 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 CD14P08571 375 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 TCEA1P23193 301 aaKnown RBP12.73□□□□□ -0.37
VPS26A-205ENST00000489656 SHC1P29353 583 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 AQP2P41181 271 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 FOXK2Q01167 660 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 TOMM20Q15388 145 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ALG10Q5BKT4 473 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 TMPPEQ6ZT21 453 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-205ENST00000489656 YRDCQ86U90 279 aaKnown RBP12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ZADH2Q8N4Q0 377 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 TMEM251Q8N6I4 163 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 FAM98AQ8NCA5 519 aaKnown RBP12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ATP6V1C2Q8NEY4 427 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ZNF417Q8TAU3 575 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 SLC25A36Q96CQ1 311 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ZNF587Q96SQ5 575 aaPredicted RBP12.73□□□□□ -0.37
VPS26A-205ENST00000489656 ACKR4Q9NPB9 350 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 CHST11Q9NPF2 352 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 CLN6Q9NWW5 311 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 TAS2R5Q9NYW4 299 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 KLHL21Q9UJP4 597 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 B3GALT5Q9Y2C3 310 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 CSAG2Q9Y5P2 127 aa12.73□□□□□ -0.37
VPS26A-205ENST00000489656 A0A087WV48 116 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 A0A1W2PNV4 684 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 NPIPB13A6NJU9 1138 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 KDM4EB2RXH2 506 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-205ENST00000489656 NPIPB4C9JG80 1138 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 M0R129 80 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 TLX2O43763 284 aaPredicted RBP12.72□□□□□ -0.37
VPS26A-205ENST00000489656 TRAPPC6AO75865 159 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 IFNGP01579 166 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 IGHMP01871 453 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 GTF2E2P29084 291 aaKnown RBP12.72□□□□□ -0.37
VPS26A-205ENST00000489656 FMO3P31513 532 aa12.72□□□□□ -0.37
VPS26A-205ENST00000489656 RPL4P36578 427 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms