RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CCNA2P20248 432 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 CD80P33681 288 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 MAP3K8P41279 467 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 H3F3AP84243 136 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
HDAC6-233ENST00000489352 PAX8Q06710 450 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 DLG1Q12959 904 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 LCP2Q13094 533 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ESCO2Q56NI9 601 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 TMEM225Q6GV28 225 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 CMIPQ8IY22 773 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 SPICQ8N5J4 248 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ZSCAN4Q8NAM6 433 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-233ENST00000489352 CPEB3Q8NE35 698 aaKnown RBP9.72□□□□□ -0.85
HDAC6-233ENST00000489352 OR9K2Q8NGE7 335 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 UPRTQ96BW1 309 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF524Q96C55 264 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ITPKCQ96DU7 683 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 OTUB1Q96FW1 271 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-233ENST00000489352 MS4A4EQ96PG1 132 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF385AQ96PM9 386 aaKnown RBP9.72□□□□□ -0.85
HDAC6-233ENST00000489352 TBX15Q96SF7 602 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 OR11A1Q9GZK7 315 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 C16orf95Q9H693 158 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 NANOGQ9H9S0 305 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 CTPS2Q9NRF8 586 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 ACER3Q9NUN7 267 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 SLCO1C1Q9NYB5 712 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 EGFL7Q9UHF1 273 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 GUCA1BQ9UMX6 200 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 TEX264Q9Y6I9 313 aa9.72□□□□□ -0.85
HDAC6-233ENST00000489352 STAB2Q8WWQ8 2551 aa9.71□□□□□ -0.85
HDAC6-233ENST00000489352 ZNF816-ZNF321PA0A0X1KG74 233 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 E9PQ18 207 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 IFI6P09912 130 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 NHLRC4P0CG21 123 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 CD79AP11912 226 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 DRD4P21917 467 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 CRABP2P29373 138 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 SLC6A9P48067 706 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 FNTAP49354 379 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 ATP12AP54707 1039 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 KLF3P57682 345 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 RAE1P78406 368 aaKnown RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 ARF1P84077 181 aaKnown RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 BTKQ06187 659 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 TRAF3Q13114 568 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 ZKSCAN8Q15776 578 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 MOGQ16653 247 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 GGTA1PQ4G0N0 100 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 PRAMEF8Q5VWM4 474 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 PRAMEF7Q5VXH5 474 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 DHRS7BQ6IAN0 325 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 RGS7BPQ6MZT1 257 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 NIPAL3Q6P499 406 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 KLC3Q6P597 504 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 ZCCHC12Q6PEW1 402 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 Q6ZSV7 163 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 ZNF551Q7Z340 670 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 C11orf44Q8N8P7 122 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 HOXB13Q92826 284 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 DDIT4LQ96D03 193 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 SF3B5Q9BWJ5 86 aaKnown RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 PALMDQ9NP74 551 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 KIF17Q9P2E2 1029 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 NKX1-2Q9UD57 310 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-233ENST00000489352 DSPPQ9NZW4 1301 aa9.71□□□□□ -0.86
HDAC6-233ENST00000489352 SACSQ9NZJ4 4579 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 DNALI1O14645 258 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-233ENST00000489352 OTCP00480 354 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 KRT6AP02538 564 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 KRT6BP04259 564 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 HSD3B1P14060 373 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 TSPAN8P19075 237 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 HSD3B2P26439 372 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 CXCR5P32302 372 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 SPRP35270 261 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-233ENST00000489352 KRT6CP48668 564 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 SELENOPP49908 381 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 ZNF763Q0D2J5 394 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 PDE7AQ13946 482 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 GSG1Q2KHT4 349 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 PGBD2Q6P3X8 592 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 CMC1Q7Z7K0 106 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 ZFP28Q8NHY6 868 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 KIF18AQ8NI77 898 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 SYNPRQ8TBG9 265 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 PMM1Q92871 262 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 CDS1Q92903 461 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 PHF21BQ96EK2 531 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 MS4A3Q96HJ5 214 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 DCLRE1CQ96SD1 692 aaKnown RBP9.7□□□□□ -0.86
HDAC6-233ENST00000489352 CPNE1Q99829 537 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 EGLN1Q9GZT9 426 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 NELFAQ9H3P2 528 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 DENND2DQ9H6A0 471 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-233ENST00000489352 ACSS3Q9H6R3 686 aa9.7□□□□□ -0.86
HDAC6-233ENST00000489352 TAS2R7Q9NYW3 318 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms