RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 OPN1SWP03999 348 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 VIMP08670 466 aaKnown RBP21.96■■□□□ 1.11
HMGN1-217ENST00000489072 GZMMP51124 257 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 OR1Q1Q15612 314 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 TRMT5Q32P41 509 aaKnown RBP21.96■■□□□ 1.11
HMGN1-217ENST00000489072 ZNF672Q499Z4 452 aaPredicted RBP21.96■■□□□ 1.11
HMGN1-217ENST00000489072 ALG10BQ5I7T1 473 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 CREB3L2Q70SY1 520 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 EPHX4Q8IUS5 362 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 BHLHE22Q8NFJ8 381 aaPredicted RBP21.96■■□□□ 1.11
HMGN1-217ENST00000489072 GPR32P1Q8NGA4 272 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 OR10A6Q8NH74 314 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 TMEM171Q8WVE6 324 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 GSX2Q9BZM3 304 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 SLCO5A1Q9H2Y9 848 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 HEATR1Q9H583 2144 aaKnown RBP21.96■■□□□ 1.11
HMGN1-217ENST00000489072 SAR1AQ9NR31 198 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 RASD1Q9Y272 281 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 ALPK2Q86TB3 2170 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 ZANQ9Y493 2812 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 A0A0B4J2E0 115 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 A0A1B0GX12 115 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 M0QX08 132 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 FXYD1O00168 92 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 FOSL1P15407 271 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 PTH2RP49190 550 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 RIPPLY3P57055 190 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 NCALDP61601 193 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 LGALS3BPQ08380 585 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 KLF10Q13118 480 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 DUSP7Q16829 419 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 FAM91A1Q658Y4 838 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 OR7E24Q6IFN5 339 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 NANOGP8Q6NSW7 305 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 ULK3Q6PHR2 472 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 SSX8Q7RTT4 187 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 KDM8Q8N371 416 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 WDR31Q8NA23 367 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 SLC38A4Q969I6 547 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 FBXW5Q969U6 566 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 NANOGQ9H9S0 305 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 SLC13A4Q9UKG4 626 aa21.95■■□□□ 1.1
HMGN1-217ENST00000489072 SHISA9B4DS77 424 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 M0R3H8 397 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 LGI1O95970 557 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 DANCRP0C864 163 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 PCGF2P35227 344 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 SELENOPP49908 381 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 ZNF83P51522 516 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 POMGNT2Q8NAT1 580 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 SLC47A1Q96FL8 570 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 ARHGDIGQ99819 225 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 GSX1Q9H4S2 264 aaPredicted RBP21.94■■□□□ 1.1
HMGN1-217ENST00000489072 CCDC134Q9H6E4 229 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 TMEM27Q9HBJ8 222 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 ZNF701Q9NV72 531 aaPredicted RBP21.94■■□□□ 1.1
HMGN1-217ENST00000489072 LAMP3Q9UQV4 416 aa21.94■■□□□ 1.1
HMGN1-217ENST00000489072 TRAV36DV7A0A075B6V5 113 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 A0A087WUJ7 227 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 SOD3P08294 240 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 PAX1P15863 534 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 MPGP29372 298 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 SLC25A3Q00325 362 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 NPTX1Q15818 432 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 NRF1Q16656 503 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 RABL3Q5HYI8 236 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 FAM69AQ5T7M9 428 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 C5orf46Q6UWT4 87 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 PRSS57Q6UWY2 283 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 YTHDF3Q7Z739 585 aaKnown RBP21.93■■□□□ 1.1
HMGN1-217ENST00000489072 C1orf162Q8NEQ5 155 aaPredicted RBP21.93■■□□□ 1.1
HMGN1-217ENST00000489072 EVA1AQ9H8M9 152 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 SLC17A5Q9NRA2 495 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 KLHL14Q9P2G3 628 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 B3GAT1Q9P2W7 334 aa21.93■■□□□ 1.1
HMGN1-217ENST00000489072 M0R082 166 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 ABCD4O14678 606 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 OR2T1O43869 369 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 CD247P20963 164 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 PTNP21246 168 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 GTF2E2P29084 291 aaKnown RBP21.92■■□□□ 1.1
HMGN1-217ENST00000489072 GRPRP30550 384 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 CRYBA2P53672 197 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 CDH12P55289 794 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 CYLC2Q14093 348 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-217ENST00000489072 REP15Q6BDI9 236 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 NIPAL3Q6P499 406 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 RANBP3LQ86VV4 465 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-217ENST00000489072 OR4D11Q8NGI4 311 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 ZNF417Q8TAU3 575 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 RNF217Q8TC41 542 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 SMAP2Q8WU79 429 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-217ENST00000489072 TAMM41Q96BW9 452 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 LRRC58Q96CX6 371 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 ZNF587Q96SQ5 575 aaPredicted RBP21.92■■□□□ 1.1
HMGN1-217ENST00000489072 C1QTNF6Q9BXI9 259 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 CXorf56Q9H5V9 222 aa21.92■■□□□ 1.1
HMGN1-217ENST00000489072 TLN2Q9Y4G6 2542 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 AIM2O14862 343 aa21.91■■□□□ 1.1
HMGN1-217ENST00000489072 TMCC2O75069 709 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms