RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 GCKP35557 465 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 CPOXP36551 454 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 MAP3K8P41279 467 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 CASP3P42574 277 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 CRATP43155 626 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 ZFP36L2P47974 494 aaKnown RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 NUDT2P50583 147 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 PPIAP62937 165 aaKnown RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 PMP22Q01453 160 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 RBPJQ06330 500 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 GNA13Q14344 377 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 TOMM20Q15388 145 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 C4orf46Q504U0 113 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 GPAT3Q53EU6 434 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 KRTCAP3Q53RY4 240 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 DCST2Q5T1A1 773 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 LCE1DQ5T752 114 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 C1orf146Q5VVC0 180 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 SUMO4Q6EEV6 95 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 AMIGO2Q86SJ2 522 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 DHDDSQ86SQ9 333 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 DEFB107AQ8IZN7 70 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 PGAM4Q8N0Y7 254 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 ZFP62Q8NB50 900 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 OR5D16Q8NGK9 328 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 OR1J4Q8NGS1 313 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 PNPT1Q8TCS8 783 aaKnown RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 ZFP90Q8TF47 636 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 OTUB1Q96FW1 271 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 TAAR6Q96RI8 345 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 NODALQ96S42 347 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 TTTY12Q9BZ98 90 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 DENND2DQ9H6A0 471 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 UBQLN4Q9NRR5 601 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 GID8Q9NWU2 228 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 TUBA8Q9NY65 449 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 SEC14L3Q9UDX4 400 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 LIPT1Q9Y234 373 aa7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 UBE2J1Q9Y385 318 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC12-221ENST00000489032 NUP214P35658 2090 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 HMX3A6NHT5 357 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 FAM166BA8MTA8 275 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 C5orf58C9J3I9 102 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 NPIPA5E9PKD4 350 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 SCO2O43819 266 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 AKAP8O43823 692 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 CDC40O60508 579 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 ICOSLGO75144 302 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 GDF1P27539 372 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 HTR1EP28566 365 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 RFC3P40938 356 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 CASP9P55211 416 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 DSTNP60981 165 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 C17orf67Q0P5P2 114 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 FADDQ13158 208 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 SLC10A1Q14973 349 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 ARHGAP11BQ3KRB8 267 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 RNASE12Q5GAN4 147 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 COQ5Q5HYK3 327 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 PAGE3Q5JUK9 113 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 LRIF1Q5T3J3 769 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 CCNJQ5T5M9 372 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 TIGD3Q6B0B8 471 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 TMEM65Q6PI78 240 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 GFRALQ6UXV0 394 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 HACD2Q6Y1H2 254 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 FJX1Q86VR8 437 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 MISPQ8IVT2 679 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 GHDCQ8N2G8 530 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 DPP10Q8N608 796 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 ZNF614Q8N883 585 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 CHDHQ8NE62 594 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 OR4K17Q8NGC6 315 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 FAM110BQ8TC76 370 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 ROPN1LQ96C74 230 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 RCN3Q96D15 328 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 REXO5Q96IC2 774 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 SORCS2Q96PQ0 1159 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 FYTTD1Q96QD9 318 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 SNX18Q96RF0 628 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 SDF2Q99470 211 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 BARD1Q99728 777 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 SH3GL1Q99961 368 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 THAP7Q9BT49 309 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 THUMPD3Q9BV44 507 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 PAIP1Q9H074 479 aaKnown RBP7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 EXO5Q9H790 373 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 PTGES2Q9H7Z7 377 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 RNPEPL1Q9HAU8 725 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 POLE3Q9NRF9 147 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 DEPPQ9NTK1 212 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 QPCTLQ9NXS2 382 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 CALML5Q9NZT1 146 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 P2RX2Q9UBL9 471 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 NPIPA1Q9UND3 350 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 WDR45Q9Y484 360 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 WIF1Q9Y5W5 379 aa7.25□□□□□ -1.25
TRAPPC12-221ENST00000489032 A0A0G2JMM0 328 aa7.24□□□□□ -1.25
TRAPPC12-221ENST00000489032 A0A1W2PPB8 328 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms