RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
FDPS-213ENST00000489003 COL12A1Q99715 3063 aa13.48□□□□□ -0.25
FDPS-213ENST00000489003 UTP20O75691 2785 aaKnown RBP13.48□□□□□ -0.25
FDPS-213ENST00000489003 SPTAN1Q13813 2472 aaKnown RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 EEF1E1-BLOC1S5C9J1V9 151 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 MS4A18H0YCH9 400 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 hCG_2039718K7EN88 272 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 EEF1E1O43324 174 aaKnown RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.256e-7■■■□□ 14.6
FDPS-213ENST00000489003 DIRAS1O95057 198 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 RHCEP18577 417 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 RBM34P42696 430 aaKnown RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 ASCL1P50553 236 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 LSM11P83369 360 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■□□□□ 8.5
FDPS-213ENST00000489003 SLC17A1Q14916 467 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 MFSD13AQ14CX5 517 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 TRAM2Q15035 370 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 MS4A18Q3C1V0 323 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 CYP4Z1Q86W10 505 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 OFCC1Q8IZS5 231 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 C10orf53Q8N6V4 93 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 ZIC4Q8N9L1 334 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 TMEM239Q8WW34 195 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 CCDC124Q96CT7 223 aaKnown RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 SEPHS2Q99611 448 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 SF3B5Q9BWJ5 86 aaKnown RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 SLC19A3Q9BZV2 496 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 C12orf49Q9H741 205 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 NMNAT1Q9HAN9 279 aaPredicted RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 CHST11Q9NPF2 352 aa13.47□□□□□ -0.25
FDPS-213ENST00000489003 FAM32AQ9Y421 112 aaKnown RBP13.47□□□□□ -0.25
FDPS-213ENST00000489003 M0R082 166 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 EBAG9O00559 213 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 KPNA4O00629 521 aaPredicted RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 GPR171O14626 319 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 VAMP5O95183 116 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 CH25HO95992 272 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 MT-ND1P03886 318 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 ZNF74Q16587 644 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 HIST2H2BCQ6DN03 193 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 H1FNTQ75WM6 255 aaPredicted RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 PIWIL3Q7Z3Z3 882 aaKnown RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 GALNT5Q7Z7M9 940 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 LRRC17Q8N6Y2 441 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 ACBD4Q8NC06 268 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 PFN4Q8NHR9 129 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 ZNF417Q8TAU3 575 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 RNASE6Q93091 150 aaKnown RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 MCUR1Q96AQ8 359 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 LRGUKQ96M69 825 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 ZNF587Q96SQ5 575 aaPredicted RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 TACO1Q9BSH4 297 aaKnown RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 RBM24Q9BX46 236 aaKnown RBP13.46□□□□□ -0.25
FDPS-213ENST00000489003 ENKD1Q9H0I2 346 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 IL1RAPQ9NPH3 570 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 C20orf141Q9NUB4 165 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 POMPQ9Y244 141 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 RASD1Q9Y272 281 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 B3GALT5Q9Y2C3 310 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 MED31Q9Y3C7 131 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 FLVCR1Q9Y5Y0 555 aa13.46□□□□□ -0.25
FDPS-213ENST00000489003 A0A087WUU8 490 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 AQP12BA6NM10 295 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 MT-ATP6P00846 226 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 FABP3P05413 133 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 ITGA2P17301 1181 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 FUT1P19526 365 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 EDNRAP25101 427 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 GTF2E2P29084 291 aaKnown RBP13.45□□□□□ -0.26
FDPS-213ENST00000489003 UQCRC1P31930 480 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 FAM27E3Q08E93 113 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 TBPL2Q6SJ96 375 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 CCDC121Q6ZUS5 278 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 CREB3L2Q70SY1 520 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 GPAT4Q86UL3 456 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 AQP12AQ8IXF9 295 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 SCAIQ8N9R8 606 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 OR9K2Q8NGE7 335 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 OXGR1Q96P68 337 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 PIP5K1AQ99755 562 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 LRMDAQ9H2I8 198 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 MRPL39Q9NYK5 338 aaKnown RBP13.45□□□□□ -0.26
FDPS-213ENST00000489003 EMC3Q9P0I2 261 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 B3GAT1Q9P2W7 334 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 SLC7A8Q9UHI5 535 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 FOXD3Q9UJU5 478 aaPredicted RBP13.45□□□□□ -0.26
FDPS-213ENST00000489003 NOSIPQ9Y314 301 aaKnown RBP13.45□□□□□ -0.26
FDPS-213ENST00000489003 CORINQ9Y5Q5 1042 aa13.45□□□□□ -0.26
FDPS-213ENST00000489003 ALPK2Q86TB3 2170 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 LOC102725191A0A1B0GVB3 256 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 PLPP3O14495 311 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 PIP5K1CO60331 668 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 STAMBPO95630 424 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 HPRP00739 348 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 IGF2P01344 180 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 H1F0P07305 194 aaKnown RBP13.44□□□□□ -0.26
FDPS-213ENST00000489003 IGFBP2P18065 325 aa13.44□□□□□ -0.26
FDPS-213ENST00000489003 PRKCDQ05655 676 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms