RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 STK11Q15831 433 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 UBE2SQ16763 222 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 MARCH8Q5T0T0 291 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 TPGS2Q68CL5 300 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 CATSPER1Q8NEC5 780 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 EXOSC8Q96B26 276 aaKnown RBP2.39□□□□□ -2.03
PTPN4-212ENST00000488896 DNAJC19Q96DA6 116 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 KCNK16Q96T55 309 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 TMEM246Q9BRR3 403 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 RSPH9Q9H1X1 276 aaPredicted RBP2.39□□□□□ -2.03
PTPN4-212ENST00000488896 SRMSQ9H3Y6 488 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 POPDC2Q9HBU9 364 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 ZNF629Q9UEG4 869 aaPredicted RBP2.39□□□□□ -2.03
PTPN4-212ENST00000488896 OR12D3Q9UGF7 316 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 PIN4Q9Y237 131 aaKnown RBP2.39□□□□□ -2.03
PTPN4-212ENST00000488896 WIF1Q9Y5W5 379 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 IGSF9BQ9UPX0 1349 aa2.39□□□□□ -2.03
PTPN4-212ENST00000488896 KRT87PA6NCN2 255 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 OR1F1O43749 312 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 NEBLO76041 1014 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 BAG2O95816 211 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 DCNP07585 359 aaKnown RBP2.38□□□□□ -2.03
PTPN4-212ENST00000488896 PGAM1P18669 254 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 NPR2P20594 1047 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 GDI1P31150 447 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 CAMLGP49069 296 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 PJVKQ0ZLH3 352 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 GGTA1PQ4G0N0 100 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 XKR4Q5GH76 650 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 OR2G6Q5TZ20 316 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 LCN12Q6JVE5 192 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 FAM71F2Q6NXP2 309 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 C19orf35Q6ZS72 473 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 MYOCDQ8IZQ8 938 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 PGAM4Q8N0Y7 254 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 HDDC3Q8N4P3 179 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 MRPL45Q9BRJ2 306 aaKnown RBP2.38□□□□□ -2.03
PTPN4-212ENST00000488896 EDEM2Q9BV94 578 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 TMEM117Q9H0C3 514 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 DEFB127Q9H1M4 99 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 DPH5Q9H2P9 285 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 MEAF6Q9HAF1 191 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 SLCO1B3Q9NPD5 702 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 SEC14L3Q9UDX4 400 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 MARCOQ9UEW3 520 aaPredicted RBP2.38□□□□□ -2.03
PTPN4-212ENST00000488896 ZNF222Q9UK12 451 aa2.38□□□□□ -2.03
PTPN4-212ENST00000488896 SEC22BO75396 215 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 TM7SF2O76062 418 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 TLX1NBP0CAT3 122 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 ARF4P18085 180 aaPredicted RBP2.37□□□□□ -2.03
PTPN4-212ENST00000488896 COX5AP20674 150 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 CYTH1Q15438 398 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 MICBQ29980 383 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 SLC25A52Q3SY17 297 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 KRTAP13-2Q52LG2 175 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 MMAAQ8IVH4 418 aaKnown RBP2.37□□□□□ -2.03
PTPN4-212ENST00000488896 OR2L13Q8N349 312 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 CLDN19Q8N6F1 224 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 ITCHQ96J02 903 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 RIT2Q99578 217 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 HSD3B7Q9H2F3 369 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 DBNDD1Q9H9R9 158 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 IL36GQ9NZH8 169 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 KCNIP1Q9NZI2 227 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 COPS3Q9UNS2 423 aa2.37□□□□□ -2.03
PTPN4-212ENST00000488896 NPIPA7E9PJI5 369 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 CISD3P0C7P0 127 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 NPIPA8P0DM63 369 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 CCND2P30279 289 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 GUCA2BQ16661 112 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 ZNF880Q6PDB4 577 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 BLOC1S2Q6QNY1 142 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 HSDL2Q6YN16 418 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 MOB3BQ86TA1 216 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 THOC6Q86W42 341 aaKnown RBP2.36□□□□□ -2.03
PTPN4-212ENST00000488896 CLEC4FQ8N1N0 589 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 KRT23Q9C075 422 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 RBKSQ9H477 322 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 NPIPA1Q9UND3 350 aa2.36□□□□□ -2.03
PTPN4-212ENST00000488896 PLA2R1Q13018 1463 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 TRAV40A0A0B4J280 105 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 A0A1W2PNV4 684 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 A0A1W2PP18 115 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 C7orf66A4D0T2 115 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 PRSS37A4D1T9 235 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 C12orf71A8MTZ7 269 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 C12orf77C9JDV5 145 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 PEX7O00628 323 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 ZSCAN12O43309 604 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 PFKFB2O60825 505 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 STMN1P16949 149 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 GAP43P17677 238 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 CELP19835 753 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 NT5EP21589 574 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 PCMT1P22061 227 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 GSSP48637 474 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 CACNG7P62955 275 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 HMGCS1Q01581 520 aa2.35□□□□□ -2.03
PTPN4-212ENST00000488896 KLHL30Q0D2K2 578 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms