RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ENTPD8Q5MY95 495 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 SWT1Q5T5J6 900 aaKnown RBP14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 FAM69AQ5T7M9 428 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 TSPO2Q5TGU0 170 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 CASP12Q6UXS9 341 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 SPNS3Q6ZMD2 512 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 WDR88Q6ZMY6 472 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 CREB3L2Q70SY1 520 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 RANBP3LQ86VV4 465 aaPredicted RBP14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 WFDC8Q8IUA0 241 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 EPHX4Q8IUS5 362 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 KDM8Q8N371 416 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 OR6S1Q8NH40 331 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 MBD6Q96DN6 1003 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 TMEM204Q9BSN7 226 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 FAM107BQ9H098 131 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 CXXC4Q9H2H0 198 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC7A10Q9NS82 523 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 ASB6Q9NWX5 421 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 B3GAT1Q9P2W7 334 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 RASD1Q9Y272 281 aa14.06□□□□□ -0.16
CTDSP1-209ENST00000488627 OR2T1O43869 369 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 PLAUP00749 431 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 RAF1P04049 648 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 ITGA5P08648 1049 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 CD53P19397 219 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 KDELR2P33947 212 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 FAPQ12884 760 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 NHLRC1Q6VVB1 395 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 HACD2Q6Y1H2 254 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 GPAT4Q86UL3 456 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 UBE2J2Q8N2K1 259 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 OR2T12Q8NG77 320 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 VANGL1Q8TAA9 524 aaPredicted RBP14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC26A7Q8TE54 656 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 RASSF5Q8WWW0 418 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 PLPPR2Q96GM1 343 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 SLC41A3Q96GZ6 507 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 MUS81Q96NY9 551 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 FOXC2Q99958 501 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 TMEM43Q9BTV4 400 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 EFCAB1Q9HAE3 211 aa14.05□□□□□ -0.16
CTDSP1-209ENST00000488627 LOC102725191A0A1B0GVB3 256 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ELOVL7A1L3X0 281 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 CPSF4LA6NMK7 179 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 M0R082 166 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 CHP2O43745 196 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 BGLAPP02818 100 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 GGT1P19440 569 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 TNFRSF1BP20333 461 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 DNASE1P24855 282 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 GRPRP30550 384 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ART1P52961 327 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 GNGT1P63211 74 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 H1FNTQ75WM6 255 aaPredicted RBP14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 AAED1Q7RTV5 226 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ARPINQ7Z6K5 226 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 PIGWQ7Z7B1 504 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 CPLX4Q7Z7G2 160 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 P2RY8Q86VZ1 359 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 MICU2Q8IYU8 434 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF417Q8TAU3 575 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ADAMTS16Q8TE57 1224 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 MOGAT1Q96PD6 335 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF587Q96SQ5 575 aaPredicted RBP14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 HOPXQ9BPY8 73 aaPredicted RBP14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF426Q9BUY5 554 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 AMBRA1Q9C0C7 1298 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 TAS2R16Q9NYV7 291 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 SELENONQ9NZV5 590 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 EDARQ9UNE0 448 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 B3GALT5Q9Y2C3 310 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 AP3M1Q9Y2T2 418 aa14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 PRRC2AP48634 2157 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ANKRD17O75179 2603 aaKnown RBP14.04□□□□□ -0.16
CTDSP1-209ENST00000488627 ROS1P08922 2347 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 TRAPPC13A5PLN9 417 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 OR5H1A6NKK0 313 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 MS4A18H0YCH9 400 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 NME4O00746 187 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 DYNC1I1O14576 645 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 ZNF432O94892 652 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 PTNP21246 168 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 SELENOPP49908 381 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 NR1H2P55055 460 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 LIPEQ05469 1076 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 GABRA6Q16445 453 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 MS4A18Q3C1V0 323 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 CYBRD1Q53TN4 286 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 NCMAPQ5T1S8 102 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 ALKBH2Q6NS38 261 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 CARM1Q86X55 608 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 ADPRHL1Q8NDY3 354 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 RNF217Q8TC41 542 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 PROX1Q92786 737 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 OXGR1Q96P68 337 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 EPYCQ99645 322 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 PRSS27Q9BQR3 290 aa14.03□□□□□ -0.16
CTDSP1-209ENST00000488627 NSRP1Q9H0G5 558 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms