RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CH25HO95992 272 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 CRHP06850 196 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 H1F0P07305 194 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 THRBP10828 461 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 RHCEP18577 417 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 AGAP20933 346 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 EDNRAP25101 427 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 GRNP28799 593 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 OPRM1P35372 400 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 RBM34P42696 430 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 P2RY4P51582 365 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 H3F3AP84243 136 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 TRAM2Q15035 370 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF74Q16587 644 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 SLC25A35Q3KQZ1 300 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 SLC46A3Q7Z3Q1 461 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 NUFIP2Q7Z417 695 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 LUZP2Q86TE4 346 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 GPAT4Q86UL3 456 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 SPATA24Q86W54 205 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 ZDHHC21Q8IVQ6 265 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 NRMQ8IXM6 262 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 ADGRG5Q8IZF4 528 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 SLC43A2Q8N370 569 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 LRRC17Q8N6Y2 441 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 OR6K3Q8NGY3 331 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 LILRB4Q8NHJ6 448 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 STARD4Q96DR4 205 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 NAA11Q9BSU3 229 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 MAGIXQ9H6Y5 334 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 NMNAT1Q9HAN9 279 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 BCO1Q9HAY6 547 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 CHST11Q9NPF2 352 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF629Q9UEG4 869 aaPredicted RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 AURKCQ9UQB9 309 aa9.83□□□□□ -0.84
UBE4B-210ENST00000488228 FAM32AQ9Y421 112 aaKnown RBP9.83□□□□□ -0.84
UBE4B-210ENST00000488228 IGKV3D-15A0A087WSY6 115 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 DHRS12A0PJE2 317 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 AQP12BA6NM10 295 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 PRSS44E7EML9 344 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 OR2T1O43869 369 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 IL18BPO95998 194 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 HPRP00739 348 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 NQO1P15559 274 aaKnown RBP9.82□□□□□ -0.84
UBE4B-210ENST00000488228 ITGA2P17301 1181 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 FUT1P19526 365 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 RRM2P31350 389 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 IFNA8P32881 189 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 MAGEA2P43356 314 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 GPR4P46093 362 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 ASCL1P50553 236 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 SLC16A1P53985 500 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 IL1RL1Q01638 556 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 CHRNB3Q05901 458 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 TFF3Q07654 80 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 SEC23BQ15437 767 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 FAM98BQ52LJ0 330 aaKnown RBP9.82□□□□□ -0.84
UBE4B-210ENST00000488228 TMEM201Q5SNT2 666 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 C1orf146Q5VVC0 180 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 PODNL1Q6PEZ8 512 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 TBPL2Q6SJ96 375 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF730Q6ZMV8 503 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 KDM8Q8N371 416 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 OR9K2Q8NGE7 335 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 OR52J3Q8NH60 311 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 SLC7A13Q8TCU3 470 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 CANT1Q8WVQ1 401 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 DHRS1Q96LJ7 313 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 ASPNQ9BXN1 380 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 SLC19A3Q9BZV2 496 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 IL1RAPQ9NPH3 570 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 KCNJ16Q9NPI9 418 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 NPDC1Q9NQX5 325 aaPredicted RBP9.82□□□□□ -0.84
UBE4B-210ENST00000488228 GLRX2Q9NS18 164 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 VNN3Q9NY84 501 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 EMC3Q9P0I2 261 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 B3GAT1Q9P2W7 334 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 PROCRQ9UNN8 238 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 MED31Q9Y3C7 131 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 FLVCR1Q9Y5Y0 555 aa9.82□□□□□ -0.84
UBE4B-210ENST00000488228 FLNBO75369 2602 aaKnown RBP9.82□□□□□ -0.84
UBE4B-210ENST00000488228 ALPK2Q86TB3 2170 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 A0A087WUU8 490 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 A0A1W2PRQ8 180 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 TCRBV3S1A0A5B6 114 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 SERPINI2O75830 405 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 CIB2O75838 187 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 MT-ATP6P00846 226 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 CGAP01215 116 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 YES1P07947 543 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 UMPSP11172 480 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 IFI30P13284 250 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 UQCRC1P31930 480 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 GABPB1Q06547 395 aaPredicted RBP9.81□□□□□ -0.84
UBE4B-210ENST00000488228 PMS2P3Q13401 168 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 CCNIQ14094 377 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 DGCR6Q14129 220 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 SLC17A1Q14916 467 aa9.81□□□□□ -0.84
UBE4B-210ENST00000488228 EXOC3L2Q2M3D2 409 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms