RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 SGCBQ16585 318 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 CTF1Q16619 201 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ALG10Q5BKT4 473 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 DCAF10Q5QP82 559 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ARMC4Q5T2S8 1044 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 SLC22A10Q63ZE4 541 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ASCL5Q7RTU5 278 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 MAMDC2Q7Z304 686 aaPredicted RBP8.53□□□□□ -1.04
SF3B1-211ENST00000487698 CYB561A3Q8NBI2 242 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 PROKR2Q8NFJ6 384 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ADAMTS14Q8WXS8 1223 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 IP6K3Q96PC2 410 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 BCL7BQ9BQE9 202 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 MND1Q9BWT6 205 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 KLHL1Q9NR64 748 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ERGIC3Q9Y282 383 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 FREM2Q5SZK8 3169 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 M0R3G1 203 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 IMPA2O14732 288 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 OR2T1O43869 369 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 APOL3O95236 402 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 AHSA1O95433 338 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 LIMS3P0CW19 117 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 LIMS4P0CW20 117 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 IL11P20809 199 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 PAICSP22234 425 aaKnown RBP8.53□□□□□ -1.04
SF3B1-211ENST00000487698 RBMS1P29558 406 aaKnown RBP8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ETV1P50549 477 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.53□□□□□ -1.04
SF3B1-211ENST00000487698 PAQR6Q6TCH4 344 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 SHFQ7M4L6 423 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 TMPRSS7Q7RTY8 843 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 MDGA2Q7Z553 956 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 P2RY8Q86VZ1 359 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF227Q86WZ6 799 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 PLCZ1Q86YW0 608 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 GPALPP1Q8IXQ4 340 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 IL22RA1Q8N6P7 574 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 NPEPL1Q8NDH3 523 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 SDR9C7Q8NEX9 313 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 OR4F15Q8NGB8 312 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 OR52E2Q8NGJ4 325 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 OR4K13Q8NH42 304 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 RASD2Q96D21 266 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 TMEM41AQ96HV5 264 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 THOC3Q96J01 351 aaKnown RBP8.53□□□□□ -1.04
SF3B1-211ENST00000487698 TSC22D3Q99576 134 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ZNF649Q9BS31 505 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 HAO2Q9NYQ3 351 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 TAS2R5Q9NYW4 299 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 H2AFY2Q9P0M6 372 aaPredicted RBP8.53□□□□□ -1.04
SF3B1-211ENST00000487698 SEC14L4Q9UDX3 406 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 MED12Q93074 2177 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 KIAA1549Q9HCM3 1950 aa8.53□□□□□ -1.04
SF3B1-211ENST00000487698 ALPK2Q86TB3 2170 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 TEX13CA0A0J9YWL9 993 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 TMEM129A0AVI4 362 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 SLC22A31A6NKX4 558 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 SHISA8B8ZZ34 492 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 NOL3O60936 208 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 DXOO77932 396 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 HIST1H2ABP04908 130 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 F13BP05160 661 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 CLUP10909 449 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 LIFP15018 202 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 CD36P16671 472 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 ADH6P28332 368 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 GRPRP30550 384 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 SDHAP31040 664 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 NOVA1P51513 510 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 CTXN1P60606 82 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 DBPQ10586 325 aaPredicted RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 AQP6Q13520 282 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 MED22Q15528 200 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 SLC6A19Q695T7 634 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 C19orf48Q6RUI8 117 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 HIST3H2AQ7L7L0 130 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 ERI1Q8IV48 349 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 BEST3Q8N1M1 668 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 GALNT15Q8N3T1 639 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 FAM98AQ8NCA5 519 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 ZNF485Q8NCK3 441 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 LSM14AQ8ND56 463 aaKnown RBP8.52□□□□□ -1.05
SF3B1-211ENST00000487698 OR4K17Q8NGC6 315 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 MFSD8Q8NHS3 518 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 HIST1H2ACQ93077 130 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 OTULINQ96BN8 352 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 ZBTB8AQ96BR9 441 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 ARL5BQ96KC2 179 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 Q96M85 177 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 OPALINQ96PE5 141 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 TSPAN32Q96QS1 320 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 TEAD3Q99594 435 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 MGLLQ99685 303 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 POTEKPQ9BYX7 375 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 NDEL1Q9GZM8 345 aa8.52□□□□□ -1.05
SF3B1-211ENST00000487698 RACGAP1Q9H0H5 632 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms