RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 IDUAP35475 653 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 RPS5P46782 204 aaKnown RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 OR3A2P47893 321 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 PCYT1AP49585 367 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 CLK1P49759 484 aaKnown RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 P2RY4P51582 365 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SLC16A1P53985 500 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 FOXG1P55316 489 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 RGS8P57771 180 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 GNGT1P63211 74 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SLC35A1P78382 337 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 LGALS3BPQ08380 585 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 RBBP4Q09028 425 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SLC17A1Q14916 467 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 MAPRE2Q15555 327 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 OR1Q1Q15612 314 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 NRF1Q16656 503 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ZSWIM7Q19AV6 140 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 VMACQ2NL98 169 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 OTUD3Q5T2D3 398 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 C1orf140Q5VVS0 124 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 C6orf89Q6UWU4 347 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SEZ6L2Q6UXD5 910 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 WDR88Q6ZMY6 472 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 BEND4Q6ZU67 534 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 STK32CQ86UX6 486 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 LSMEM1Q8N8F7 131 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ZIC4Q8N9L1 334 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 OR8J3Q8NGG0 315 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 OR52E4Q8NGH9 312 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 OR6T1Q8NGN1 323 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 VANGL1Q8TAA9 524 aaPredicted RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 PIGXQ8TBF5 258 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SLC35B4Q969S0 331 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 S100PBPQ96BU1 408 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ZHX1-C8orf76Q96EF9 292 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 FAM46AQ96IP4 442 aaKnown RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF583Q96ND8 569 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ARHGDIGQ99819 225 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 SPATA5L1Q9BVQ7 753 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 KRTAP4-6Q9BYQ5 205 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 POTEKPQ9BYX7 375 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ACTR6Q9GZN1 396 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 MYLK2Q9H1R3 596 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ARMC7Q9H6L4 198 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 PLEKHF2Q9H8W4 249 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 GP6Q9HCN6 339 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 CMTM6Q9NX76 183 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 TESQ9UGI8 421 aaKnown RBP6.33□□□□□ -1.4
UBE4B-209ENST00000487244 NDRG3Q9UGV2 375 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 ITGB1BP2Q9UKP3 347 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 TRAPPC4Q9Y296 219 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 FLVCR1Q9Y5Y0 555 aa6.33□□□□□ -1.4
UBE4B-209ENST00000487244 HEATR1Q9H583 2144 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 USF3Q68DE3 2245 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 A0A0B4J2E0 115 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 A0A1B0GX12 115 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 SCO2A0A1W2PP80 73 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 AQP7P3A6NL99 342 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 CPSF4LA6NMK7 179 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 NME4O00746 187 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 AIM2O14862 343 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 SLC22A2O15244 555 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 DNPH1O43598 174 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 SNX3O60493 162 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 SHOX2O60902 331 aaPredicted RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 LYZL6O75951 148 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 LYPD3O95274 346 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 LGI1O95970 557 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 THY1P04216 161 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 GPIP06744 558 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 COX4I1P13073 169 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 FSTP19883 344 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 PSMB1P20618 241 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 COX5AP20674 150 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 CBLP22681 906 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 CRYGSP22914 178 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 IGHV1-2P23083 117 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 FKBP2P26885 142 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 CDH12P55289 794 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 NCALDP61601 193 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 PDK3Q15120 406 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 ALG10BQ5I7T1 473 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 SFRP5Q5T4F7 317 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 FBXW10Q5XX13 1052 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 PAQR6Q6TCH4 344 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 CASP12Q6UXS9 341 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 Q6ZT83 130 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 CCDC80Q76M96 950 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 GALNT5Q7Z7M9 940 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 PATL1Q86TB9 770 aaKnown RBP6.32□□□□□ -1.4
UBE4B-209ENST00000487244 GPAT4Q86UL3 456 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 LURAP1LQ8IV03 231 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 ZNF100Q8IYN0 542 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 KDM8Q8N371 416 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 OR9K2Q8NGE7 335 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 TAAR8Q969N4 342 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 APH1AQ96BI3 265 aa6.32□□□□□ -1.4
UBE4B-209ENST00000487244 SLC25A36Q96CQ1 311 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms