RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 SMIM3Q9BZL3 60 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 MCTS1Q9ULC4 181 aaKnown RBP13.64□□□□□ -0.23
EPHB4-206ENST00000487222 TP53TG5Q9Y2B4 290 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 CDC14CA4D256 554 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 FAM155AB1AL88 458 aaPredicted RBP13.64□□□□□ -0.23
EPHB4-206ENST00000487222 SLC34A2O95436 690 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 DBHP09172 617 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 TACR3P29371 465 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 FAM78AQ5JUQ0 283 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 MMP21Q8N119 569 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 WDSUB1Q8N9V3 476 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 OR56B1Q8NGI3 324 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 KRBOX1C9JBD0 128 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 TGM6O95932 706 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 FUCA1P04066 466 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 PCBD1P61457 104 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 EEF1A1P68104 462 aaKnown RBP13.64□□□□□ -0.23
EPHB4-206ENST00000487222 OR14A16Q8NHC5 309 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 FBXO7Q9Y3I1 522 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 MAKP20794 623 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 ALKAL2Q6UX46 152 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 PRR18Q8N4B5 295 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 RSC1A1Q92681 617 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 RADILQ96JH8 1075 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 NMNAT3Q96T66 252 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 MICU1Q9BPX6 476 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 ULBP2Q9BZM5 246 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 HRH4Q9H3N8 390 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 WDR76Q9H967 626 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 NPFFR2Q9Y5X5 522 aa13.64□□□□□ -0.23
EPHB4-206ENST00000487222 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
EPHB4-206ENST00000487222 SURF4O15260 269 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 SSX4O60224 188 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 CLEC2LP0C7M8 214 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 PTBP1P26599 531 aaKnown RBP eCLIP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ERVFC1P60507 584 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 FCN2Q15485 313 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 BEX5Q5H9J7 111 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ABHD17CQ6PCB6 329 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 OPN5Q6U736 354 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 DPY19L2P2Q6ZN68 376 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 MIB2Q96AX9 1013 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 LRRC46Q96FV0 321 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF681Q96N22 645 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 OR14A2Q96R54 314 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 VN1R3Q9BXE9 311 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 C1orf198Q9H425 327 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 PRSS16Q9NQE7 514 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 B3GNT2Q9NY97 397 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 PTRH2Q9Y3E5 179 aaKnown RBP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 CHRM4P08173 479 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 TRIM23P36406 574 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ETV5P41161 510 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 GPR176Q14439 515 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 OR4K15Q8NH41 348 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 TMEM255BQ8WV15 326 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 UBE2FQ969M7 185 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 UBQLN3Q9H347 655 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 SAGE1Q9NXZ1 904 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ETV7Q9Y603 341 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 BTAF1O14981 1849 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 TRBV11-1A0A0K0K1C0 115 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ANKRD33BA6NCL7 494 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 CD38P28907 300 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 CSNK1G2P78368 415 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 MRPS21P82921 87 aaKnown RBP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 FAPQ12884 760 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 SLC9A3R2Q15599 337 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 OR5M10Q6IEU7 315 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 SLC35D2Q76EJ3 337 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 SIAH3Q8IW03 269 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 HHIPQ96QV1 700 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 CLEC2DQ9UHP7 191 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 PPT2Q9UMR5 302 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 POM121CA8CG34 1229 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 PIPP12273 146 aaPredicted RBP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 MMP11P24347 488 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 MFSD12Q6NUT3 480 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 DPY19L4Q7Z388 723 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 C19orf47Q8N9M1 422 aaKnown RBP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ZNF578Q96N58 590 aaPredicted RBP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 ZIC5Q96T25 663 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 CMSS1Q9BQ75 279 aaKnown RBP13.63□□□□□ -0.23
EPHB4-206ENST00000487222 LRIT1Q9P2V4 623 aa13.63□□□□□ -0.23
EPHB4-206ENST00000487222 LCMT2O60294 686 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 CCSMST1Q4G0I0 132 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 YIF1BQ5BJH7 314 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 BCDIN3DQ7Z5W3 292 aaKnown RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 TMEFF1Q8IYR6 380 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 OR13C9Q8NGT0 318 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 GCDHQ92947 438 aaPredicted RBP13.62□□□□□ -0.23
EPHB4-206ENST00000487222 GIMAP5Q96F15 307 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 HDAC8Q9BY41 377 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 ZBP1Q9H171 429 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 EMC7Q9NPA0 242 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 FBXL2Q9UKC9 423 aa13.62□□□□□ -0.23
EPHB4-206ENST00000487222 SUSD5O60279 629 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms