RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 FUT3P21217 361 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 COX7A1P24310 79 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 CXCR2P25025 360 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 CD1BP29016 333 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 RBMXP38159 391 aaKnown RBP2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 OPRD1P41143 372 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 CAV2P51636 162 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 GPM6AP51674 278 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 GNB2P62879 340 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TGFBR3Q03167 851 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 ZNF763Q0D2J5 394 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 PLD1Q13393 1074 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 NSDHLQ15738 373 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 IL17AQ16552 155 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 C1orf100Q5SVJ3 147 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 ENPP6Q6UWR7 440 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TMIGD1Q6UXZ0 262 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 IL34Q6ZMJ4 242 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 RUFY3Q7L099 469 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 PRSS41Q7RTY9 318 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 SLC26A11Q86WA9 606 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 NBPF5PQ86XG9 351 aaPredicted RBP2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 C6orf223Q8N319 242 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 NEIL3Q8TAT5 605 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 DCUN1D4Q92564 292 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 UCN3Q969E3 161 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 NUS1Q96E22 293 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 CMTM7Q96FZ5 175 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TMEM101Q96IK0 257 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TCEANC2Q96MN5 208 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 OXGR1Q96P68 337 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TSG101Q99816 390 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 P2RY13Q9BPV8 354 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TRIM62Q9BVG3 475 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 CHMP4BQ9H444 224 aaKnown RBP2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 SLC25A22Q9H936 323 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 HOXC10Q9NYD6 342 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 ZNF639Q9UID6 485 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 TRAF3IP3Q9Y228 551 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 NPTNQ9Y639 398 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 PLEKHG1Q9ULL1 1385 aa2.44□□□□□ -2.02
SNRNP27-204ENST00000487029 THSD7BQ9C0I4 1608 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 NSG1A0A0A6YYJ2 146 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 OR5B21A6NL26 309 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 A8MUA0 341 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 P04436 131 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 ELK1P19419 428 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 NCF2P19878 526 aaPredicted RBP2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 TAGLN2P37802 199 aaKnown RBP2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 GLP1RP43220 463 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 WNT4P56705 351 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 OR5I1Q13606 314 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 C6orf226Q5I0X4 101 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 CTSL3PQ5NE16 218 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 MARCH8Q5T0T0 291 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 CASC10Q5T4H9 136 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 UQCC3Q6UW78 93 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 Q6ZN92 141 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 H2BFWTQ7Z2G1 175 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 ECHDC2Q86YB7 292 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 NUDCD3Q8IVD9 361 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 CNPY4Q8N129 248 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 TM4SF19Q96DZ7 209 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 ZNF641Q96N77 438 aaPredicted RBP2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 NAT9Q9BTE0 207 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 ROPN1BQ9BZX4 212 aaPredicted RBP2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 ACTR6Q9GZN1 396 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 NIPAL2Q9H841 368 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 NMRAL1Q9HBL8 299 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 SUN2Q9UH99 717 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 CELA1Q9UNI1 258 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 KCNIP3Q9Y2W7 256 aa2.43□□□□□ -2.02
SNRNP27-204ENST00000487029 A0A0U1RQS6 177 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 ARHGEF35A5YM69 484 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 BTBD17A6NE02 478 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 USP27XA6NNY8 438 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 E9PBE3 544 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 H0Y8G0 127 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 HAS3O00219 553 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 FOXE1O00358 373 aaPredicted RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 AGPAT2O15120 278 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 TOM1O60784 492 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 SNX4O95219 450 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 SERPINA3P01011 423 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 TBPP20226 339 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 CMA1P23946 247 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 HTR1EP28566 365 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 CD1CP29017 333 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 PRDX3P30048 256 aaKnown RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 VDAC2P45880 294 aaPredicted RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 ARRB1P49407 418 aaPredicted RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 SULT1E1P49888 294 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 DLX1P56177 255 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 NUP107P57740 925 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 TAS2R19P59542 299 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 PRPS1P60891 318 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 SCRN3Q0VDG4 424 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 PSG7Q13046 419 aa2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 MRPL28Q13084 256 aaKnown RBP2.42□□□□□ -2.02
SNRNP27-204ENST00000487029 GNMTQ14749 295 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms