RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 OR52E4Q8NGH9 312 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 MFSD8Q8NHS3 518 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 NFKBIDQ8NI38 313 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 SMAP2Q8WU79 429 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-207ENST00000486975 RSPO3Q9BXY4 272 aaPredicted RBP12.67□□□□□ -0.38
CLDN11-207ENST00000486975 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 ZNF385DQ9H6B1 395 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 EVA1AQ9H8M9 152 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 LAMP3Q9UQV4 416 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 USF3Q68DE3 2245 aa12.67□□□□□ -0.38
CLDN11-207ENST00000486975 NSD1Q96L73 2696 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 PRORSD1PA6NEY8 169 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 OR6C65A6NJZ3 312 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 EVPLLA8MZ36 301 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 SHISA9B4DS77 424 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 H7C1Q1 480 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 EDF1O60869 148 aaKnown RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 AHSA1O95433 338 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 HOXB4P17483 251 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 PTAFRP25105 342 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 MPGP29372 298 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 FOXG1P55316 489 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 BNIP2Q12982 314 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 ADRM1Q16186 407 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 PGGHGQ32M88 737 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 KLHL17Q6TDP4 642 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 AAED1Q7RTV5 226 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 DTX2Q86UW9 622 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 BHLHE22Q8NFJ8 381 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 ZNF385AQ96PM9 386 aaKnown RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 CPPED1Q9BRF8 314 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 SLCO5A1Q9H2Y9 848 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 FAIMQ9NVQ4 179 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 UPB1Q9UBR1 384 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 LEF1Q9UJU2 399 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-207ENST00000486975 TRIM33Q9UPN9 1127 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 RASD1Q9Y272 281 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 AMDHD2Q9Y303 409 aa12.66□□□□□ -0.38
CLDN11-207ENST00000486975 ABCD4O14678 606 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 HEXAP06865 529 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 PNMTP11086 282 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 SLC6A2P23975 617 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 ATP5J2P56134 94 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 EGR4Q05215 589 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 RBBP4Q09028 425 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 SCARB2Q14108 478 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 RUNDC3AQ59EK9 446 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 FAM91A1Q658Y4 838 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 TMEM225Q6GV28 225 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 CREB3L2Q70SY1 520 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 ABHD12BQ7Z5M8 362 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 CIARTQ8N365 385 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 HIPK4Q8NE63 616 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 DNAJA4Q8WW22 397 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 TRMT61AQ96FX7 289 aaKnown RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 ZNF607Q96SK3 696 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 SMR3AQ99954 134 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 TRAF4Q9BUZ4 470 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 PTDSS2Q9BVG9 487 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 ADPRHL2Q9NX46 363 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 CISD1Q9NZ45 108 aaKnown RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 RPS6KB2Q9UBS0 482 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 TESQ9UGI8 421 aaKnown RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
CLDN11-207ENST00000486975 MAGED1Q9Y5V3 778 aaPredicted RBP12.65□□□□□ -0.38
CLDN11-207ENST00000486975 A0A1B0GWA3 101 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 TRIM64A6NGJ6 449 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 TRIM64BA6NI03 449 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 ELOA3DA6NLF2 546 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-207ENST00000486975 OR2T1O43869 369 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 SERPINB7O75635 380 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 CD40P25942 277 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 HTR2AP28223 471 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 CDH11P55287 796 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 PCBP3P57721 371 aaKnown RBP12.64□□□□□ -0.39
CLDN11-207ENST00000486975 HOXC5Q00444 222 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 LTBQ06643 244 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 ELOA3BQ3SY89 546 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 FAM69AQ5T7M9 428 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 GPAT4Q86UL3 456 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 COMTD1Q86VU5 262 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 WDR31Q8NA23 367 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 ELOA3Q8NG57 546 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 OR6S1Q8NH40 331 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 OR52N5Q8NH56 324 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 ANKRD27Q96NW4 1050 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 ZNF317Q96PQ6 595 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-207ENST00000486975 OBP2BQ9NPH6 170 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 RCE1Q9Y256 329 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 VPS13CQ709C8 3753 aa12.64□□□□□ -0.39
CLDN11-207ENST00000486975 PLCE1Q9P212 2302 aa12.63□□□□□ -0.39
CLDN11-207ENST00000486975 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms