RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 HIST1H2AGP0C0S8 130 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 ATP1B2P14415 290 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 NQO1P15559 274 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 GLRA1P23415 457 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 AVPR1AP37288 418 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 TAS2R60P59551 318 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 RAP2BP61225 183 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 RAE1P78406 368 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 OGDHQ02218 1023 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 BNIP2Q12982 314 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 IL18R1Q13478 541 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 CTTNQ14247 550 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 GK3PQ14409 553 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 MELKQ14680 651 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 OR4D1Q15615 310 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 NPTX1Q15818 432 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 TNXAQ16473 311 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 BSXQ3C1V8 233 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 IDNKQ5T6J7 187 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 VASNQ6EMK4 673 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 SFRP4Q6FHJ7 346 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 SV2AQ7L0J3 742 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 SETD3Q86TU7 594 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 CCDC190Q86UF4 302 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 CACUL1Q86Y37 369 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 NAXDQ8IW45 347 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 SLC35F3Q8IY50 421 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 PGAM4Q8N0Y7 254 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 CFAP52Q8N1V2 620 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 PARP8Q8N3A8 854 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 Q8N402 240 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 GALNT16Q8N428 558 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 RIBC1Q8N443 379 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 LNX2Q8N448 690 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 TMEM156Q8N614 296 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 LRRC75AQ8NAA5 344 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 SLC38A9Q8NBW4 561 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 DDHD1Q8NEL9 900 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 OR2L5Q8NG80 312 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 WDR36Q8NI36 951 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 VANGL1Q8TAA9 524 aaPredicted RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 LGALS14Q8TCE9 139 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 ACTRT1Q8TDG2 376 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 TCP10LQ8TDR4 215 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 CA5BP1Q8WTZ4 195 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 TMEM170AQ8WVE7 144 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 KCTD4Q8WVF5 259 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 NUDCD2Q8WVJ2 157 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 HIST1H2ACQ93077 130 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 PIGTQ969N2 578 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 TCEAL4Q96EI5 215 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 PAGE5Q96GU1 130 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 ZC3HAV1LQ96H79 300 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 SGK494Q96LW2 274 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 IL4I1Q96RQ9 567 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 SLC22A12Q96S37 553 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 DCLRE1CQ96SD1 692 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 KLHDC3Q9BQ90 382 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 PCGF1Q9BSM1 259 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 MCRIP2Q9BUT9 160 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 TRMT61BQ9BVS5 477 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 ACTRT3Q9BYD9 372 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 ZCCHC4Q9H5U6 513 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 SLA2Q9H6Q3 261 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 MARCH7Q9H992 704 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 POLD4Q9HCU8 107 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 ABCB9Q9NP78 766 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 ASB6Q9NWX5 421 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 MIOSQ9NXC5 875 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 EPHA6Q9UF33 1036 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 DUSP13Q9UII6 198 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 NXT1Q9UKK6 140 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 ICKQ9UPZ9 632 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 GSTK1Q9Y2Q3 226 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 MEMO1Q9Y316 297 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 ZNF337Q9Y3M9 751 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 GMPPBQ9Y5P6 360 aa4.99□□□□□ -1.61
SF1-217ENST00000486960 EPPK1P58107 5090 aaKnown RBP4.99□□□□□ -1.61
SF1-217ENST00000486960 SVEP1Q4LDE5 3571 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 ELOA3CA0A087WX78 387 aaPredicted RBP4.98□□□□□ -1.61
SF1-217ENST00000486960 A0A1B0GV72 72 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 A0A1W2PRD5 423 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 C5orf60A6NFR6 353 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 ZNF98A6NK75 572 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 ELOA3DA6NLF2 546 aaPredicted RBP4.98□□□□□ -1.61
SF1-217ENST00000486960 TMEM150CB9EJG8 249 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 E9PQ18 207 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 M0QXV9 152 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 M0QZK8 103 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 M0R3G1 203 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 ACOX3O15254 700 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 SYNGR3O43761 229 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 KLRC4O43908 158 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 DPM1O60762 260 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 PRKRAO75569 313 aaKnown RBP4.98□□□□□ -1.61
SF1-217ENST00000486960 CCNKO75909 580 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 NDUFA7O95182 113 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 CLDN7O95471 211 aa4.98□□□□□ -1.61
SF1-217ENST00000486960 HLA-DQA2P01906 255 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms