RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 NXF5Q9H1B4 397 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 ACOXLQ9NUZ1 547 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 TEX13CA0A0J9YWL9 993 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 TMEM150CB9EJG8 249 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 FLRT2O43155 660 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 LANCL1O43813 399 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 ORC5O43913 435 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 UTS2O95399 124 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 ATXN8OSP0DMR3 200 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 TFPIP10646 304 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 AQP2P41181 271 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 CCR4P51679 360 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 GPR176Q14439 515 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 KCNAB1Q14722 419 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 C14orf28Q4W4Y0 310 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 NKAIN2Q5VXU1 208 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 LEG1Q6P5S2 330 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 CBLN3Q6UW01 205 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 TMEM151BQ8IW70 566 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 LRRC75AQ8NAA5 344 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 CLIP3Q96DZ5 547 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 RNF170Q96K19 258 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 FYTTD1Q96QD9 318 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 YIPF2Q9BWQ6 316 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 CCDC86Q9H6F5 360 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 TMEM165Q9HC07 324 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 ABRACLQ9P1F3 81 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 SLC6A5Q9Y345 797 aa16.41■□□□□ 0.22
PDLIM7-207ENST00000486828 FRG2CA6NGY1 282 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 C19orf67A6NJJ6 358 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 LMO7DNF2Z398 122 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 H3BMH7 237 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 BLOC1S5-TXNDC5H3BN57 136 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 ZNF264O43296 627 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 GPRIN2O60269 458 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 EPXP11678 715 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 APEHP13798 732 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 RORAP35398 523 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 EPHA4P54764 986 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 CEP78Q5JTW2 689 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 LINC01590Q5TEZ4 76 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 APOOLQ6UXV4 268 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 TTLL10Q6ZVT0 673 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 OVCH1Q7RTY7 1134 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 NOXA1Q86UR1 476 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 C10orf53Q8N6V4 93 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 DTX3Q8N9I9 347 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 CREB3L1Q96BA8 519 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 Q96M85 177 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 OR1F2PQ96R84 312 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 ABHD1Q96SE0 405 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 NANSQ9NR45 359 aa16.4■□□□□ 0.22
PDLIM7-207ENST00000486828 BDP1A6H8Y1 2624 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 IGKV3D-11A0A0A0MRZ8 115 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 A0A1B0GVC2 190 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 A0A1W2PPK0 400 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 A6NIN4 97 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 A8MUA0 341 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 OR2B3O76000 313 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 CD14P08571 375 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ATF1P18846 271 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 AHCYP23526 432 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 MST1P26927 711 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC6A1P30531 599 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 CDKN2AP42771 156 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 SLC25A1P53007 311 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 HNRNPKP61978 463 aaKnown RBP eCLIP16.39■□□□□ 0.216e-7■■■■■ 31.4
PDLIM7-207ENST00000486828 CD83Q01151 205 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 CDK10Q15131 360 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 HACD4Q5VWC8 232 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 UNQ9370/PRO34162Q6UXP9 181 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 FAM122BQ7Z309 247 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 JAZF1Q86VZ6 243 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 TCTE3Q8IZS6 198 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 CADM4Q8NFZ8 388 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 OR5H6Q8NGV6 325 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 RPS4Y2Q8TD47 263 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 PHYHIPQ92561 330 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 LCORQ96JN0 433 aaPredicted RBP16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 MOGAT1Q96PD6 335 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 OR14A2Q96R54 314 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ALG12Q9BV10 488 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 BEX2Q9BXY8 128 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 OR8D2Q9GZM6 311 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 MMP25Q9NPA2 562 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 MRTO4Q9UKD2 239 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 KNL1Q8NG31 2342 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 RHPN2P1A8MT19 583 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 EEF1E1O43324 174 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 IGKV3-11P04433 115 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 YES1P07947 543 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ASAH2BP0C7U1 165 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 PSMB10P40306 273 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 OR1D4P47884 311 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 AGFG1P52594 562 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 EGR4Q05215 589 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ALG10Q5BKT4 473 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 TIGD3Q6B0B8 471 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 LYPD4Q6UWN0 246 aa16.39■□□□□ 0.21
PDLIM7-207ENST00000486828 ASB18Q6ZVZ8 466 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms