RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SP140LQ9H930 580 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 NPFFR2Q9Y5X5 522 aa18.52■□□□□ 0.55
HPS3-206ENST00000486530 SIRT4Q9Y6E7 314 aaPredicted RBP18.52■□□□□ 0.55
HPS3-206ENST00000486530 OR6C68A6NDL8 312 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 CD8B2A6NJW9 211 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 J3QLW9 94 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 KHNYNO15037 678 aaKnown RBP18.51■□□□□ 0.55
HPS3-206ENST00000486530 PLPP2O43688 288 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 GMFGO60234 142 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 TXNDC12O95881 172 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 TFP02787 698 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 HIST1H2ABP04908 130 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 CD8BP10966 210 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 ZNF19P17023 458 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 F8A1P23610 371 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 SDHAP31040 664 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 BCAP31P51572 246 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 SLC26A5P58743 744 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 DNASE1L3Q13609 305 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 TOMM34Q15785 309 aaPredicted RBP18.51■□□□□ 0.55
HPS3-206ENST00000486530 PAPD4Q6PIY7 484 aaKnown RBP18.51■□□□□ 0.55
HPS3-206ENST00000486530 HIST3H2AQ7L7L0 130 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 ZNF554Q86TJ5 538 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 SLC35F2Q8IXU6 374 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 HIST1H2ACQ93077 130 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 SLC26A1Q9H2B4 701 aa18.51■□□□□ 0.55
HPS3-206ENST00000486530 TRAV36DV7A0A075B6V5 113 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 C17orf51A8MQB3 221 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 CYC1P08574 325 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 POLR2HP52434 150 aaKnown RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 SLC25A1P53007 311 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 CTXN1P60606 82 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 EMC4Q5J8M3 183 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 DDI2Q5TDH0 399 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 LEG1Q6P5S2 330 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 SYS1Q8N2H4 156 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 LSM14AQ8ND56 463 aaKnown RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 OR51L1Q8NGJ5 315 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 ZPLD1Q8TCW7 415 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 TAAR8Q969N4 342 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 Q96M85 177 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 APMAPQ9HDC9 416 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 V9GYH0 126 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 D6RAR5 112 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 SLC25A12O75746 678 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 FGF5P12034 268 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 RPS5P46782 204 aaKnown RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 OR12D2P58182 307 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 RPL18Q07020 188 aaKnown RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 QPRTQ15274 297 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 ARL9Q6T311 187 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 SSX6Q7RTT6 188 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 SMAP2Q8WU79 429 aaPredicted RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 MRPL48Q96GC5 212 aaKnown RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 SPSB2Q99619 263 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 SDHCQ99643 169 aaPredicted RBP18.5■□□□□ 0.55
HPS3-206ENST00000486530 ABCB9Q9NP78 766 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 POLE4Q9NR33 117 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 OCIAD1Q9NX40 245 aa18.5■□□□□ 0.55
HPS3-206ENST00000486530 E9PI62 339 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 GLCEO94923 617 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 BGLAPP02818 100 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 CFL1P23528 166 aaKnown RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 NAA10P41227 235 aaPredicted RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 MTNR1BP49286 362 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 KRR1Q13601 381 aaKnown RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 IL11RAQ14626 422 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 GRINAQ7Z429 371 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 CPEB2Q7Z5Q1 589 aaKnown RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 POC5Q8NA72 575 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 OR8K3Q8NH51 312 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 GPR119Q8TDV5 335 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 SNRNP27Q8WVK2 155 aaKnown RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 WDR77Q9BQA1 342 aaPredicted RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 CRB3Q9BUF7 120 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 WDR70Q9NW82 654 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 TAS2R10Q9NYW0 307 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 C19orf25Q9UFG5 118 aaPredicted RBP18.49■□□□□ 0.55
HPS3-206ENST00000486530 PCNX3Q9H6A9 2034 aa18.49■□□□□ 0.55
HPS3-206ENST00000486530 TRBV11-1A0A0K0K1C0 115 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 CPNE3O75131 537 aaKnown RBP18.48■□□□□ 0.55
HPS3-206ENST00000486530 SERPINI2O75830 405 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 PTTG1O95997 202 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 MT-ATP6P00846 226 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 CDKN2AP42771 156 aaKnown RBP18.48■□□□□ 0.55
HPS3-206ENST00000486530 DEFA1P59665 94 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 DEFA3P59666 94 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 CDC20Q12834 499 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 TRA2AQ13595 282 aaKnown RBP eCLIP18.48■□□□□ 0.55
HPS3-206ENST00000486530 INSL4Q14641 139 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 CDONQ4KMG0 1287 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 GHDCQ8N2G8 530 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 RFLNBQ8N5W9 214 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 OR6K6Q8NGW6 343 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 MESP1Q9BRJ9 268 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 ARRDC1-AS1Q9H2J1 176 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 MIXL1Q9H2W2 232 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 GRHPRQ9UBQ7 328 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 VPS13AQ96RL7 3174 aa18.48■□□□□ 0.55
HPS3-206ENST00000486530 TMED7-TICAM2A0A0A6YYA0 188 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms