RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 KIAA0040Q15053 153 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 SMAD2Q15796 467 aaKnown RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 MBOAT2Q6ZWT7 520 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 MED25Q71SY5 747 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 DGLUCYQ7Z3D6 616 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 GDF7Q7Z4P5 450 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 UEVLDQ8IX04 471 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 OR8S1Q8NH09 359 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 OR56B4Q8NH76 319 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 SLC25A46Q96AG3 418 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF285Q96NJ3 590 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 UTP23Q9BRU9 249 aaKnown RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 NRSN2Q9GZP1 204 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 TWSG1Q9GZX9 223 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 DIMT1Q9UNQ2 313 aaKnown RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 FARSAQ9Y285 508 aaKnown RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 TRAPPC4Q9Y296 219 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 MEMO1Q9Y316 297 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF337Q9Y3M9 751 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 METTL12A8MUP2 240 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 MOSPD3O75425 235 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 GPX5O75715 221 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 APOC1P02654 83 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 RLN2P04090 185 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 FBXO45P0C2W1 286 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 PRPH2P23942 346 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 DRD3P35462 400 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 EPHA4P54764 986 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 SLC14A1Q13336 389 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 HTR4Q13639 388 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 GRK1Q15835 563 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF547Q8IVP9 402 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 RNF113BQ8IZP6 322 aaKnown RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 TCTE3Q8IZS6 198 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 OR7G2Q8NG99 324 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 BAHD1Q8TBE0 780 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 IFI44Q8TCB0 444 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
HDAC6-228ENST00000486227 SLC35A4Q96G79 324 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 KLHL15Q96M94 604 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 FOXN4Q96NZ1 517 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 POTEKPQ9BYX7 375 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 C2orf42Q9NWW7 574 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 BRWD1Q9NSI6 2320 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 SMLR1H3BR10 107 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 FCMRO60667 390 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 CD3GP09693 182 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 CD1CP29017 333 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 CAV3P56539 151 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 BCL2A1Q16548 175 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 STX12Q86Y82 276 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 DUSP19Q8WTR2 217 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 PGAM5Q96HS1 289 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 C4orf36Q96KX1 117 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 SH3BGRL2Q9UJC5 107 aa10.19□□□□□ -0.78
HDAC6-228ENST00000486227 FTCDNL1E5RQL4 147 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 SC5DO75845 299 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 VAMP1P23763 118 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RAP2BP61225 183 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RPS25P62851 125 aaKnown RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 OPCMLQ14982 345 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 ELP2Q6IA86 826 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 PAPD4Q6PIY7 484 aaKnown RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 BEST3Q8N1M1 668 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 OR5AK2Q8NH90 309 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 LRRC3BQ96PB8 259 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 ATG5Q9H1Y0 275 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 SLC6A20Q9NP91 592 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 BABAM2Q9NXR7 383 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TMEFF2Q9UIK5 374 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RASD1Q9Y272 281 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 AK6Q9Y3D8 172 aaKnown RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TEX46H3BTG2 121 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 SULT2B1O00204 365 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 GABRPO00591 440 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 SMAD9O15198 467 aaKnown RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 HCRTR1O43613 425 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 LGI1O95970 557 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 CLEC2LP0C7M8 214 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 GTF2F2P13984 249 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 FRKP42685 505 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 NOVA1P51513 510 aaKnown RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TMEM201Q5SNT2 666 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 HES5Q5TA89 166 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 PRICKLE2Q7Z3G6 844 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 NKAIN4Q8IVV8 208 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 KIAA1958Q8N8K9 716 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TP53I13Q8NBR0 393 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 FCRL1Q96LA6 429 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 KATNB1Q9BVA0 655 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 GSX2Q9BZM3 304 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 VNN3Q9NY84 501 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 TAS2R8Q9NYW2 309 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 C19orf53Q9UNZ5 99 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 RNF215Q9Y6U7 377 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 UCHL1P09936 223 aa10.18□□□□□ -0.78
HDAC6-228ENST00000486227 POU3F2P20265 443 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-228ENST00000486227 ETV6P41212 452 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms