RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 YTHDF3Q7Z739 585 aaKnown RBP15.53■□□□□ 0.08
COL6A1-204ENST00000486023 RANBP3LQ86VV4 465 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-204ENST00000486023 P2RY8Q86VZ1 359 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF611Q8N823 705 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 LSMEM1Q8N8F7 131 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 BHLHE22Q8NFJ8 381 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-204ENST00000486023 TSPEARQ8WU66 669 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 FBXW5Q969U6 566 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 Q96MF0 132 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 MCHR1Q99705 422 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 PTDSS2Q9BVG9 487 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 SLCO5A1Q9H2Y9 848 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 CXorf56Q9H5V9 222 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 KAT8Q9H7Z6 458 aaKnown RBP15.53■□□□□ 0.08
COL6A1-204ENST00000486023 MALT1Q9UDY8 824 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 POU2F3Q9UKI9 436 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 RASD1Q9Y272 281 aa15.53■□□□□ 0.08
COL6A1-204ENST00000486023 MED13LQ71F56 2210 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 PRR14LQ5THK1 2151 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 M0R082 166 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 MRASO14807 208 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SMAD7O15105 426 aaKnown RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 VAMP5O95183 116 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 NQO1P15559 274 aaKnown RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF43P17038 809 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 GRPRP30550 384 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 PTH2RP49190 550 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 P2RY4P51582 365 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 CLDN17P56750 224 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 TGFBR3Q03167 851 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 RBBP4Q09028 425 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 TRMT5Q32P41 509 aaKnown RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF672Q499Z4 452 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 RABL3Q5HYI8 236 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 NANOGP8Q6NSW7 305 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 KLHL17Q6TDP4 642 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SEZ6L2Q6UXD5 910 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SNX32Q86XE0 403 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 KRTAP1-3Q8IUG1 177 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 EPHX4Q8IUS5 362 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF417Q8TAU3 575 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SMAP2Q8WU79 429 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SLC38A4Q969I6 547 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 GTPBP3Q969Y2 492 aaKnown RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 TMEM45BQ96B21 275 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 MUS81Q96NY9 551 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 ZNF587Q96SQ5 575 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SMR3AQ99954 134 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 ECSITQ9BQ95 431 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 NANOGQ9H9S0 305 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 SAR1AQ9NR31 198 aa15.52■□□□□ 0.08
COL6A1-204ENST00000486023 CISD1Q9NZ45 108 aaKnown RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 TESQ9UGI8 421 aaKnown RBP15.52■□□□□ 0.08
COL6A1-204ENST00000486023 ACANP16112 2415 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 IGKV1D-42A0A075B6H8 117 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 TRAV36DV7A0A075B6V5 113 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 CPSF4LA6NMK7 179 aaKnown RBP15.51■□□□□ 0.07
COL6A1-204ENST00000486023 FTCDNL1E5RQL4 147 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 OR2T1O43869 369 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 TPST2O60704 377 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 MPGP29372 298 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 CDH12P55289 794 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 HIKESHIQ53FT3 197 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 REP15Q6BDI9 236 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 SLC22A25Q6T423 547 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 TMEM108Q6UXF1 575 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 Q71RC1 249 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-204ENST00000486023 RBM45Q8IUH3 476 aaKnown RBP15.51■□□□□ 0.07
COL6A1-204ENST00000486023 LRRC75A-AS1Q8N1F1 130 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 LRRC58Q96CX6 371 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 C12orf10Q9HB07 376 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 ARMCX1Q9P291 453 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 SLC25A15Q9Y619 301 aa15.51■□□□□ 0.07
COL6A1-204ENST00000486023 LRRN3E7EW58 273 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 AIM2O14862 343 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 UPK3AO75631 287 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 SERPINI2O75830 405 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 LGI1O95970 557 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 SOD3P08294 240 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 CDKN1AP38936 164 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 CDH11P55287 796 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 ATP5J2P56134 94 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 PCBP3P57721 371 aaKnown RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 RPS4XP62701 263 aaKnown RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 SPOCK1Q08629 439 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 MAPRE2Q15555 327 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 VMACQ2NL98 169 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 FAM69AQ5T7M9 428 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 INTS11Q5TA45 600 aaKnown RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 FAM91A1Q658Y4 838 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 KLHL24Q6TFL4 600 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 C6orf89Q6UWU4 347 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 H1FNTQ75WM6 255 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 PATL1Q86TB9 770 aaKnown RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 WDR31Q8NA23 367 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 POMGNT2Q8NAT1 580 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 GPR32P1Q8NGA4 272 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 OR6T1Q8NGN1 323 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 RADILQ96JH8 1075 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 OXGR1Q96P68 337 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms