RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ROBO4Q8WZ75 1007 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 KTI12Q96EK9 354 aaPredicted RBP7.39□□□□□ -1.23
SF3A1-208ENST00000485618 SGTBQ96EQ0 304 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 ARL5BQ96KC2 179 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 SEPHS2Q99611 448 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 NPAS1Q99742 590 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 KLHDC3Q9BQ90 382 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 PRR14Q9BWN1 585 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 HDHD5Q9BXW7 423 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 CADM1Q9BY67 442 aaKnown RBP7.39□□□□□ -1.23
SF3A1-208ENST00000485618 FKRPQ9H9S5 495 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 NMNAT1Q9HAN9 279 aaPredicted RBP7.39□□□□□ -1.23
SF3A1-208ENST00000485618 ELOVL5Q9NYP7 299 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 NDUFAF4Q9P032 175 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.39□□□□□ -1.23
SF3A1-208ENST00000485618 KLHL13Q9P2N7 655 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 STX18Q9P2W9 335 aaKnown RBP7.39□□□□□ -1.23
SF3A1-208ENST00000485618 Q9UFV3 132 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF229Q9UJW7 825 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 PROCRQ9UNN8 238 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 AURKCQ9UQB9 309 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 POMPQ9Y244 141 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 V9GYQ6 96 aa7.39□□□□□ -1.23
SF3A1-208ENST00000485618 IGKV3D-15A0A087WSY6 115 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 LOC102725191A0A1B0GVB3 256 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 DHRS12A0PJE2 317 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ZC3H12DA2A288 527 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 AQP7P3A6NL99 342 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF726A6NNF4 738 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 EEF1E1-BLOC1S5C9J1V9 151 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ACOT8O14734 319 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 EEF1E1O43324 174 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 SMNDC1O75940 238 aaKnown RBP eCLIP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 KRT33AO76009 404 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 GADD45GO95257 159 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 CNOT4O95628 575 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 SAGP10523 405 aaPredicted RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 CD8BP10966 210 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 FCGR1AP12314 374 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 TNFRSF1BP20333 461 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 AHCYP23526 432 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 YAP1P46937 504 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ASCL1P50553 236 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 SLC16A1P53985 500 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 H3F3AP84243 136 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 SPIBQ01892 262 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 FGD3Q5JSP0 725 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 BEND4Q6ZU67 534 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 MBOAT2Q6ZWT7 520 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 SSX8Q7RTT4 187 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 COMTD1Q86VU5 262 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 CCDC71Q8IV32 467 aaPredicted RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 MARVELD2Q8N4S9 558 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ADPRHL1Q8NDY3 354 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 OR4D11Q8NGI4 311 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ITLN2Q8WWU7 325 aaPredicted RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 TAAR8Q969N4 342 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 BPIFA2Q96DR5 249 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 CLPTM1LQ96KA5 538 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 C7orf34Q96L11 122 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 OXGR1Q96P68 337 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF426Q9BUY5 554 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 CHID1Q9BWS9 393 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 SRXN1Q9BYN0 137 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 COQ10BQ9H8M1 238 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 REEP1Q9H902 201 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 BCO1Q9HAY6 547 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 PLSCR4Q9NRQ2 329 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 MRPL39Q9NYK5 338 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 GMPR2Q9P2T1 348 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 NDRG3Q9UGV2 375 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 A4GNTQ9UNA3 340 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 NOSIPQ9Y314 301 aaKnown RBP7.38□□□□□ -1.23
SF3A1-208ENST00000485618 NOX1Q9Y5S8 564 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 LRBAP50851 2863 aa7.38□□□□□ -1.23
SF3A1-208ENST00000485618 hCG_2039718K7EN88 272 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 TNFRSF11BO00300 401 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 KPNA4O00629 521 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-208ENST00000485618 SMAD9O15198 467 aaKnown RBP7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ENTPD5O75356 428 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 AQP8O94778 261 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 TOXO94900 526 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 AKR7A3O95154 331 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 CH25HO95992 272 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 IMPDH2P12268 514 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 IFI30P13284 250 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 FUT1P19526 365 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ATP6V1B2P21281 511 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 SHC1P29353 583 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 GRPRP30550 384 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 SLC9A3P48764 834 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 PCYT1AP49585 367 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 ADORA2A-AS1P86434 159 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 MS4A2Q01362 244 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 TGFBR3Q03167 851 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 EGR4Q05215 589 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 PUDPQ08623 228 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 FOXD4Q12950 439 aaPredicted RBP7.37□□□□□ -1.23
SF3A1-208ENST00000485618 SLC17A1Q14916 467 aa7.37□□□□□ -1.23
SF3A1-208ENST00000485618 P2RY6Q15077 328 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms