RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 CBR4Q8N4T8 237 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 TMEM99Q8N816 258 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 OR13C2Q8NGS9 318 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 OR5J2Q8NH18 312 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 ZNF417Q8TAU3 575 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 ZNF587Q96SQ5 575 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-207ENST00000485465 RBM4BQ9BQ04 359 aaKnown RBP15.73■□□□□ 0.11
CHMP3-207ENST00000485465 RBM4Q9BWF3 364 aaKnown RBP15.73■□□□□ 0.11
CHMP3-207ENST00000485465 UCK2Q9BZX2 261 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 CHST11Q9NPF2 352 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 SEC14L4Q9UDX3 406 aa15.73■□□□□ 0.11
CHMP3-207ENST00000485465 IGHV3-15A0A0B4J1V0 119 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 AQP7P3A6NL99 342 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 CLCA1A8K7I4 914 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 ZNF814B7Z6K7 855 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 SOCS2O14508 198 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 EI24O14681 340 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 SLC19A2O60779 497 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 PTP4A3O75365 173 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 PRB1P04280 392 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 KLK2P20151 261 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 PEX2P28328 305 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 P2RY4P51582 365 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 PPP2R2BQ00005 443 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 COX10Q12887 443 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 FHL1Q13642 323 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 DAG1Q14118 895 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 SF3B4Q15427 424 aaKnown RBP eCLIP15.72■□□□□ 0.11
CHMP3-207ENST00000485465 ZNF239Q16600 458 aaKnown RBP15.72■□□□□ 0.11
CHMP3-207ENST00000485465 ZBED5Q49AG3 693 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 OGFRL1Q5TC84 451 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-207ENST00000485465 FBXW10Q5XX13 1052 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 KDM4DQ6B0I6 523 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 Q6ZPB1 254 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-207ENST00000485465 NANOGNBQ7Z5D8 188 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 ADGRE4PQ86SQ3 457 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 ADPRHL1Q8NDY3 354 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 OR51A7Q8NH64 312 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 DNAJC9Q8WXX5 260 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 ROBO4Q8WZ75 1007 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 TNFRSF13CQ96RJ3 184 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 UCN2Q96RP3 112 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 SLC29A1Q99808 456 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 USE1Q9NZ43 259 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 MCTS1Q9ULC4 181 aaKnown RBP15.72■□□□□ 0.11
CHMP3-207ENST00000485465 B3GALT5Q9Y2C3 310 aa15.72■□□□□ 0.11
CHMP3-207ENST00000485465 TRAV27A0A087WT01 109 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 B8ZZF3 427 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 BLOC1S5-TXNDC5H3BN57 136 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PLPP3O14495 311 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PRRG2O14669 202 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 SMAD9O15198 467 aaKnown RBP15.71■□□□□ 0.11
CHMP3-207ENST00000485465 WDR1O75083 606 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 TSPAN19P0C672 248 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 GABRA1P14867 456 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PTGER4P35408 488 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 ALDH3A2P51648 485 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 RPS4XP62701 263 aaKnown RBP15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PON3Q15166 354 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 LRRC36Q1X8D7 754 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 ANKDD1AQ495B1 522 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 ACSF3Q4G176 576 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PPP4R4Q6NUP7 873 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 KLHL17Q6TDP4 642 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 RASSF6Q6ZTQ3 369 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 CCDC103Q8IW40 242 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 ZNF843Q8N446 348 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 MAGEE2Q8TD90 523 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-207ENST00000485465 TRIB1Q96RU8 372 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 MCCC2Q9HCC0 563 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PAPOLBQ9NRJ5 636 aaKnown RBP15.71■□□□□ 0.11
CHMP3-207ENST00000485465 KRT84Q9NSB2 600 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 TAS2R5Q9NYW4 299 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 TMEFF2Q9UIK5 374 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-207ENST00000485465 SIGLEC7Q9Y286 467 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 POFUT2Q9Y2G5 429 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 HIF3AQ9Y2N7 669 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 ZNF175Q9Y473 711 aa15.71■□□□□ 0.11
CHMP3-207ENST00000485465 PRRC2CQ9Y520 2896 aaKnown RBP15.7■□□□□ 0.1
CHMP3-207ENST00000485465 SLC22A20A6NK97 555 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 FIGNL2A6NMB9 653 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 MS4A18H0YCH9 400 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 RAMP1O60894 148 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 OR6A2O95222 327 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 HPRP00739 348 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 ALPLP05186 524 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 HOXD4P09016 255 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-207ENST00000485465 ADORA3P0DMS8 318 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 IGFBP5P24593 272 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 UQCRC1P31930 480 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 AQP2P41181 271 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 ZP4Q12836 540 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 MS4A18Q3C1V0 323 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 PLXDC2Q6UX71 529 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 FCRLAQ7L513 359 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 KIF18BQ86Y91 864 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 DOLPP1Q86YN1 238 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 MOSPD2Q8NHP6 518 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 FNDC9Q8TBE3 224 aa15.7■□□□□ 0.1
CHMP3-207ENST00000485465 NRG4Q8WWG1 115 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms