RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 NAAAQ02083 359 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 ATG16L1Q676U5 607 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 LRRC74BQ6ZQY2 392 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 EPHX4Q8IUS5 362 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 SVOPLQ8N434 492 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 OIT3Q8WWZ8 545 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 BCL2L2Q92843 193 aaPredicted RBP12.08□□□□□ -0.48
VARS-226ENST00000483275 PMM1Q92871 262 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 SNX18Q96RF0 628 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 ADAM19Q9H013 955 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 TMEM45AQ9NWC5 275 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 BTNL2Q9UIR0 455 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 RAP2CQ9Y3L5 183 aa12.08□□□□□ -0.48
VARS-226ENST00000483275 LOC390937A0A1W2PQ73 354 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 CDHR4A6H8M9 788 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 FAAHO00519 579 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 CRYAAP02489 173 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 BCHEP06276 602 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 DBIP07108 87 aaKnown RBP12.07□□□□□ -0.48
VARS-226ENST00000483275 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 UQCRBP14927 111 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 ZNF23P17027 643 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 RPL14P50914 215 aaKnown RBP12.07□□□□□ -0.48
VARS-226ENST00000483275 IDH3GP51553 393 aaPredicted RBP12.07□□□□□ -0.48
VARS-226ENST00000483275 ROR2Q01974 943 aaKnown RBP12.07□□□□□ -0.48
VARS-226ENST00000483275 HGFACQ04756 655 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 CCNIQ14094 377 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 GTDC1Q4AE62 458 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 C1orf140Q5VVS0 124 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 PRAMEF8Q5VWM4 474 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 PRAMEF7Q5VXH5 474 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 TMEM225Q6GV28 225 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 CREB3L2Q70SY1 520 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 CLIP4Q8N3C7 705 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 OR52P1PQ8NH57 321 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 ZNF837Q96EG3 531 aaPredicted RBP12.07□□□□□ -0.48
VARS-226ENST00000483275 OR52E6Q96RD3 313 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 KATNB1Q9BVA0 655 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 TAPBPLQ9BX59 468 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 KCNK9Q9NPC2 374 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 AIG1Q9NVV5 245 aa12.07□□□□□ -0.48
VARS-226ENST00000483275 ZNF443Q9Y2A4 671 aaPredicted RBP12.07□□□□□ -0.48
VARS-226ENST00000483275 SH3PXD2BA1X283 911 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 hCG_2039718K7EN88 272 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 NDUFS8O00217 210 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 SDHDO14521 159 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 TM9SF1O15321 606 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 PGRP06401 933 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 NCF2P19878 526 aaPredicted RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 HNF1AP20823 631 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 THBS4P35443 961 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 CLDN17P56750 224 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 ARF1P84077 181 aaKnown RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 NPRL3Q12980 569 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 MPP2Q14168 576 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 GNA13Q14344 377 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 TRIP10Q15642 601 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 DPY19L1Q2PZI1 675 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 ANKRD16Q6P6B7 361 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 SERPINA11Q86U17 422 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 PEX5LQ8IYB4 626 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 LRRC34Q8IZ02 419 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 CDK20Q8IZL9 346 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 SLC25A36Q96CQ1 311 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 SF3B5Q9BWJ5 86 aaKnown RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 TPK1Q9H3S4 243 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 PLK3Q9H4B4 646 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 WDR55Q9H6Y2 383 aaPredicted RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 MTHFD2LQ9H903 347 aaPredicted RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 MEAF6Q9HAF1 191 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 ARGLU1Q9NWB6 273 aaPredicted RBP12.06□□□□□ -0.48
VARS-226ENST00000483275 CHST2Q9Y4C5 530 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 DSPPQ9NZW4 1301 aa12.06□□□□□ -0.48
VARS-226ENST00000483275 A8MVM7 634 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 TMEM229AB2RXF0 380 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 B9A039 149 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 STAMBPO95630 424 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 IGFBP1P08833 259 aaPredicted RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 PNMTP11086 282 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 DAOP14920 347 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 APEX1P27695 318 aaKnown RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 EPHA3P29320 983 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 RPS5P46782 204 aaKnown RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 PPOXP50336 477 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 MVDP53602 400 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 LIN52Q52LA3 116 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 BEND6Q5SZJ8 279 aaPredicted RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 WBP2NLQ6ICG8 309 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 RINLQ6ZS11 566 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 SPATA21Q7Z572 469 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 ABHD12BQ7Z5M8 362 aaPredicted RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 TRIML2Q8N7C3 387 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 VPS33AQ96AX1 596 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 KTI12Q96EK9 354 aaPredicted RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 PAIP2Q9BPZ3 127 aaKnown RBP12.05□□□□□ -0.48
VARS-226ENST00000483275 PTDSS2Q9BVG9 487 aa12.05□□□□□ -0.48
VARS-226ENST00000483275 P2RX2Q9UBL9 471 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms