RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ZNF282Q9UDV7 671 aaPredicted RBP5.87□□□□□ -1.47
CLK1-212ENST00000482590 SLC2A6Q9UGQ3 507 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 ERVK-11Q9UQG0 969 aa5.87□□□□□ -1.47
CLK1-212ENST00000482590 A0A0A0MQY5 61 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 TRAV17A0A0B4J275 112 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 HYKKA2RU49 373 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 TMEM89A2RUT3 159 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 IQCF5A8MTL0 148 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 PFDN6O15212 129 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 SRPX2O60687 465 aaPredicted RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 ZG16O60844 167 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 CBR3O75828 277 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 APRTP07741 180 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 ANXA5P08758 320 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 ZCCHC18P0CG32 403 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 SAGP10523 405 aaPredicted RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 NR2F6P10588 404 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 SRD5A1P18405 259 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 SRMP19623 302 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 HNF1AP20823 631 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 MSR1P21757 451 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 UCP1P25874 307 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 HAAOP46952 286 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 PPT1P50897 306 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 ZNF84P51523 738 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 RPP38P78345 283 aaKnown RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 BASP1P80723 227 aaKnown RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 ACVR1Q04771 509 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 SELPLGQ14242 412 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 GRB7Q14451 532 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 TATDN3Q17R31 274 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 PCID2Q5JVF3 399 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 WASHC2DQ5SRD0 308 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 TTC23Q5W5X9 447 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 FRMPD2BQ6IN97 320 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 C8orf74Q6P047 294 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 CBLN3Q6UW01 205 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 CD164L2Q6UWJ8 174 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 KIRREL2Q6UWL6 708 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 RAD9BQ6WBX8 426 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 MEPCEQ7L2J0 689 aaKnown RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 TRPM8Q7Z2W7 1104 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 MAVSQ7Z434 540 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 PAQR7Q86WK9 346 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 LRRC6Q86X45 466 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 PAPD5Q8NDF8 572 aaKnown RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 GJC3Q8NFK1 279 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 OR2L3Q8NG85 312 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 RPL36ALQ969Q0 106 aaKnown RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 C8orf44Q96CB5 159 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 LRR1Q96L50 414 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 RAB40CQ96S21 281 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 ACTRT3Q9BYD9 372 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 FRMD8P1Q9BZ68 369 aaPredicted RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 CALHM2Q9HA72 323 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 DNAJC4Q9NNZ3 241 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 PAK5Q9P286 719 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 C3orf18Q9UK00 162 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 TTC7AQ9ULT0 858 aaPredicted RBP5.86□□□□□ -1.47
CLK1-212ENST00000482590 A3GALT2U3KPV4 340 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 C2CD3Q4AC94 2353 aa5.86□□□□□ -1.47
CLK1-212ENST00000482590 TRGV8A0A0C4DH27 118 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 OR6C65A6NJZ3 312 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 PCP4L1A6NKN8 68 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 VSTM2BA6NLU5 285 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 E5RI56 91 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 VCYO14598 125 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 SSX4O60224 188 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 LCMT2O60294 686 aaKnown RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 CTSVO60911 334 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 CLPXO76031 633 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 C1orf105O95561 183 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 APOA1P02647 267 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 CATP04040 527 aaKnown RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 OR2T7P0C7T2 308 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 COX6A1P12074 109 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 HOXB6P17509 224 aaKnown RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 RPS3P23396 243 aaKnown RBP eCLIP5.85□□□□□ -1.47
CLK1-212ENST00000482590 MPZP25189 248 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 RPA3P35244 121 aaPredicted RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 TUBA4AP68366 448 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 RASGEF1BQ0VAM2 473 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 ACKR1Q16570 336 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 CTU2Q2VPK5 515 aaKnown RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 CCSMST1Q4G0I0 132 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 VWA2Q5GFL6 755 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 IL23RQ5VWK5 629 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 GFRALQ6UXV0 394 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 ZNF66Q6ZN08 573 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 NDUFAF7Q7L592 441 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 CCDC190Q86UF4 302 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 HMGCLL1Q8TB92 370 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 TRMT10AQ8TBZ6 339 aaKnown RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 NR4A3Q92570 626 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 CDKL2Q92772 493 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 GGHQ92820 318 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 RERGQ96A58 199 aaPredicted RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 ZNF285Q96NJ3 590 aa5.85□□□□□ -1.47
CLK1-212ENST00000482590 MTERF1Q99551 399 aaKnown RBP5.85□□□□□ -1.47
CLK1-212ENST00000482590 NPAS2Q99743 824 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms