RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 RNF223E7ERA6 249 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 OVOL3O00110 214 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 NPIPB7O75200 414 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 SASH3O75995 380 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 LGI1O95970 557 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 CD8AP01732 235 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 IGHV4-39P01824 125 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 PAX1P15863 534 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 H2AFXP16104 143 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-212ENST00000482251 PPIBP23284 216 aaKnown RBP9.18□□□□□ -0.94
CPSF4-212ENST00000482251 MPGP29372 298 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 PRKAR1BP31321 381 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 ACVR1BP36896 505 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 ATP4BP51164 291 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 RGS8P57771 180 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-212ENST00000482251 TUBA1BP68363 451 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 TUBA4AP68366 448 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 CYP51A1Q16850 503 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 ZSWIM7Q19AV6 140 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 ALG10BQ5I7T1 473 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 OR7E24Q6IFN5 339 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 KLHL17Q6TDP4 642 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 KLHL24Q6TFL4 600 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 TUBA1AQ71U36 451 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 LINGO2Q7L985 606 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 RETREG3Q86VR2 466 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 KRT73Q86Y46 540 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 WDR31Q8NA23 367 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 SMYD1Q8NB12 490 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 TRMT61AQ96FX7 289 aaKnown RBP9.18□□□□□ -0.94
CPSF4-212ENST00000482251 RADILQ96JH8 1075 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 MUS81Q96NY9 551 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 WFDC6Q9BQY6 131 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 SF3B5Q9BWJ5 86 aaKnown RBP9.18□□□□□ -0.94
CPSF4-212ENST00000482251 CACNG6Q9BXT2 260 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 AMBRA1Q9C0C7 1298 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 SLC17A5Q9NRA2 495 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 FAIMQ9NVQ4 179 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 PARPBPQ9NWS1 579 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 ANGPT4Q9Y264 503 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 ATP23Q9Y6H3 246 aa9.18□□□□□ -0.94
CPSF4-212ENST00000482251 IGKV1D-42A0A075B6H8 117 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 A0A096LPE4 126 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 A0A1W2PPZ6 126 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 FAM171A2A8MVW0 826 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 EVPLLA8MZ36 301 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 INAFM1C9JVW0 142 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF587BE7ETH6 402 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ATP6V1G2-DDX39BF2Z307 99 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 M0R082 166 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 M0R3H8 397 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ANGPT2O15123 496 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 EDF1O60869 148 aaKnown RBP9.17□□□□□ -0.94
CPSF4-212ENST00000482251 UPK3AO75631 287 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 SLC6A2P23975 617 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 PTAFRP25105 342 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 CLDN17P56750 224 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 TGFBR3Q03167 851 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 DMTNQ08495 405 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 NFYCQ13952 458 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ADRM1Q16186 407 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 DHRS4L2Q6PKH6 230 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 DLEU7Q6UYE1 221 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 CREB3L2Q70SY1 520 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ARMC8Q8IUR7 673 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 EPHX4Q8IUS5 362 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 C17orf78Q8N4C9 275 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 POMGNT2Q8NAT1 580 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 HIPK4Q8NE63 616 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 C1orf162Q8NEQ5 155 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-212ENST00000482251 MFSD8Q8NHS3 518 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF417Q8TAU3 575 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 STK35Q8TDR2 534 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 TAAR8Q969N4 342 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 HS6ST2Q96MM7 605 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF587Q96SQ5 575 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-212ENST00000482251 SPATA5L1Q9BVQ7 753 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 ZNF385DQ9H6B1 395 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 TMEM38AQ9H6F2 299 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 TESQ9UGI8 421 aaKnown RBP9.17□□□□□ -0.94
CPSF4-212ENST00000482251 LEF1Q9UJU2 399 aaPredicted RBP9.17□□□□□ -0.94
CPSF4-212ENST00000482251 SLC13A4Q9UKG4 626 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 CORO2BQ9UQ03 480 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 RASD1Q9Y272 281 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 AMDHD2Q9Y303 409 aa9.17□□□□□ -0.94
CPSF4-212ENST00000482251 FN1P02751 2386 aaKnown RBP9.17□□□□□ -0.94
CPSF4-212ENST00000482251 NIPBLQ6KC79 2804 aaeCLIP9.16□□□□□ -0.94
CPSF4-212ENST00000482251 LRRN3E7EW58 273 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 SSX4O60224 188 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 TMCC2O75069 709 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 SERPINI2O75830 405 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 SEC14L2O76054 403 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 NQO1P15559 274 aaKnown RBP9.16□□□□□ -0.94
CPSF4-212ENST00000482251 GPX2P18283 190 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 GRPRP30550 384 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 FABP6P51161 128 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 PRPS1P60891 318 aa9.16□□□□□ -0.94
CPSF4-212ENST00000482251 IRX1P78414 480 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-212ENST00000482251 C1DQ13901 141 aaKnown RBP9.16□□□□□ -0.94
CPSF4-212ENST00000482251 OR1Q1Q15612 314 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms