RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 OR2T7P0C7T2 308 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 CELP19835 753 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 MST1P26927 711 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 ITPKBP27987 946 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 TMED10P49755 219 aaKnown RBP14.34□□□□□ -0.11
RXRA-202ENST00000481739 EIF3IQ13347 325 aaKnown RBP14.34□□□□□ -0.11
RXRA-202ENST00000481739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.34□□□□□ -0.11
RXRA-202ENST00000481739 TMEM164Q5U3C3 297 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 C22orf42Q6IC83 251 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 PAPD4Q6PIY7 484 aaKnown RBP14.34□□□□□ -0.11
RXRA-202ENST00000481739 TMEM205Q6UW68 189 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 MARCH3Q86UD3 253 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 CCDC190Q86UF4 302 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 EGFL6Q8IUX8 553 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 CENPSQ8N2Z9 138 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 ARIH2OSQ8N7S6 290 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 OR2T27Q8NH04 317 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 OR4K13Q8NH42 304 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 SMPDL3BQ92485 455 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 TMCO6Q96DC7 493 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 WDFY2Q96P53 400 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 CNN2Q99439 309 aaKnown RBP14.34□□□□□ -0.11
RXRA-202ENST00000481739 SMURF1Q9HCE7 757 aa14.34□□□□□ -0.11
RXRA-202ENST00000481739 TRAV36DV7A0A075B6V5 113 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 IGHV3-20A0A0C4DH32 117 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 UPK1BO75841 260 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 HIST1H2ABP04908 130 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 CFL1P23528 166 aaKnown RBP14.33□□□□□ -0.12
RXRA-202ENST00000481739 UQCRC1P31930 480 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 POLR2HP52434 150 aaKnown RBP14.33□□□□□ -0.12
RXRA-202ENST00000481739 HSF2Q03933 536 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 EGR4Q05215 589 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 TBC1D25Q3MII6 688 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 ALG10Q5BKT4 473 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 GPR139Q6DWJ6 353 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 MRPL14Q6P1L8 145 aaKnown RBP14.33□□□□□ -0.12
RXRA-202ENST00000481739 HIST3H2AQ7L7L0 130 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 GRINAQ7Z429 371 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 NANOGNBQ7Z5D8 188 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 CPEB2Q7Z5Q1 589 aaKnown RBP14.33□□□□□ -0.12
RXRA-202ENST00000481739 SYS1Q8N2H4 156 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 C10orf53Q8N6V4 93 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 TMEM99Q8N816 258 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 CYB561A3Q8NBI2 242 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 NPEPL1Q8NDH3 523 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 SDR9C7Q8NEX9 313 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 TMEM234Q8WY98 164 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 TTC9Q92623 222 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 HIST1H2ACQ93077 130 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 TMEM203Q969S6 136 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 SPSB2Q99619 263 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 KATNB1Q9BVA0 655 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 DDA1Q9BW61 102 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 NMNAT2Q9BZQ4 307 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 GALNT8Q9NY28 637 aa14.33□□□□□ -0.12
RXRA-202ENST00000481739 HEATR5AQ86XA9 2040 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 SLC35F4A4IF30 521 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 SLC25A12O75746 678 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 CDRT1O95170 752 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 LALBAP00709 142 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 OCM2P0CE71 109 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 OCMP0CE72 109 aaPredicted RBP14.32□□□□□ -0.12
RXRA-202ENST00000481739 F8A1P23610 371 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 SDHAP31040 664 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 DIO1P49895 249 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 SLC25A1P53007 311 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 KRR1Q13601 381 aaKnown RBP14.32□□□□□ -0.12
RXRA-202ENST00000481739 OXA1LQ15070 435 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 TRIM16LQ309B1 348 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 C6orf15Q6UXA7 325 aaPredicted RBP14.32□□□□□ -0.12
RXRA-202ENST00000481739 BTLAQ7Z6A9 289 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 JAZF1Q86VZ6 243 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 KLBQ86Z14 1044 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 B4GALNT2Q8NHY0 566 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 DDOQ99489 341 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 SLC30A2Q9BRI3 323 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 CCDC32Q9BV29 185 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 SNTG1Q9NSN8 517 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 RYDENQ9NUL5 291 aaKnown RBP14.32□□□□□ -0.12
RXRA-202ENST00000481739 MOKQ9UQ07 419 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 KNTC1P50748 2209 aa14.32□□□□□ -0.12
RXRA-202ENST00000481739 PFDN1O60925 122 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 NUDT14O95848 222 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 CD79BP40259 229 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 FABP5Q01469 135 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 FAM69BQ5VUD6 431 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 FCRLBQ6BAA4 426 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 FAM198BQ6UWH4 519 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 FAM122BQ7Z309 247 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 LRRC75AQ8NAA5 344 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 OR6S1Q8NH40 331 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 STK35Q8TDR2 534 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 TM9SF2Q99805 663 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 TAS2R10Q9NYW0 307 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 DAPK2Q9UIK4 370 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 PADI1Q9ULC6 663 aa14.31□□□□□ -0.12
RXRA-202ENST00000481739 PTRH2Q9Y3E5 179 aaKnown RBP14.31□□□□□ -0.12
RXRA-202ENST00000481739 ADAM18Q9Y3Q7 739 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms