RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CEND1Q8N111 149 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 BCORP1Q8N888 145 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ARL10Q8N8L6 244 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 SDSLQ96GA7 329 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 SLC25A51Q9H1U9 297 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 ACTR8Q9H981 624 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 COG4Q9H9E3 785 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 GPN2Q9H9Y4 310 aaPredicted RBP2.51□□□□□ -2.01
COPA-204ENST00000481522 SOHLH2Q9NX45 425 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 NINJ2Q9NZG7 142 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 FOXJ3Q9UPW0 622 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 PIN4Q9Y237 131 aaKnown RBP2.51□□□□□ -2.01
COPA-204ENST00000481522 CACNA1CQ13936 2221 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 TNRC6BQ9UPQ9 1833 aaKnown RBP2.51□□□□□ -2.01
COPA-204ENST00000481522 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
COPA-204ENST00000481522 CADP27708 2225 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 KRT87PA6NCN2 255 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 ANKRD30BLA7E2S9 258 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TBL1XO60907 577 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 STX11O75558 287 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 STAM2O75886 525 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 THRBP10828 461 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 GAP43P17677 238 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 ARF4P18085 180 aaPredicted RBP2.5□□□□□ -2.01
COPA-204ENST00000481522 ELK1P19419 428 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 RABIFP47224 123 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 WNT4P56705 351 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 VLDLRP98155 873 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 OTUD4Q01804 1114 aaKnown RBP2.5□□□□□ -2.01
COPA-204ENST00000481522 BDH1Q02338 343 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 OR2B11Q5JQS5 317 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TOR1AIP1Q5JTV8 583 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 VAX1Q5SQQ9 334 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 WSCD1Q658N2 575 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 OR8G2PQ6IF36 304 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 FRA10AC1Q70Z53 315 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TRPM8Q7Z2W7 1104 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TMEM179BQ7Z7N9 219 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 SERPINA9Q86WD7 417 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 OR10H4Q8NGA5 316 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 ANKRD49Q8WVL7 239 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 IL1F10Q8WWZ1 152 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 FRAT1Q92837 279 aaPredicted RBP2.5□□□□□ -2.01
COPA-204ENST00000481522 IMMP1LQ96LU5 166 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 VSTM2LQ96N03 204 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TECTBQ96PL2 329 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 KCNK16Q96T55 309 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 CNPY3Q9BT09 278 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TMEM121Q9BTD3 319 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 TBCDQ9BTW9 1192 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 VAT1LQ9HCJ6 419 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 CRLS1Q9UJA2 301 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 HOOK1Q9UJC3 728 aaKnown RBP2.5□□□□□ -2.01
COPA-204ENST00000481522 SAMD4AQ9UPU9 718 aaKnown RBP2.5□□□□□ -2.01
COPA-204ENST00000481522 RNF6Q9Y252 685 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 PPIAL4AQ9Y536 164 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 AP4B1Q9Y6B7 739 aa2.5□□□□□ -2.01
COPA-204ENST00000481522 SRRM2Q9UQ35 2752 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 ROBO3Q96MS0 1386 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 HEATR9A2RTY3 570 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 FAM231BA6NCW3 169 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 LYPLA1O75608 230 aaPredicted RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 SCRG1O75711 98 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 IGLV1-47P01700 117 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 RBMY1CP0DJD4 496 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 CPN1P15169 458 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 ATP5A1P25705 553 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 ADORA2BP29275 332 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 AXLP30530 894 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 RPL29P47914 159 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 CXCL12P48061 93 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 GPC3P51654 580 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 NAPAP54920 295 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 GMFBP60983 142 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 KLRC3Q07444 240 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 SPP2Q13103 211 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 PVRIGQ6DKI7 326 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 CXCL17Q6UXB2 119 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 MISPQ8IVT2 679 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 ZNF619Q8N2I2 560 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 OR9A4Q8NGU2 314 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 TRUB1Q8WWH5 349 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 FGGYQ96C11 551 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 NOL4LQ96MY1 436 aaPredicted RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 SLC30A2Q9BRI3 323 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 KRT23Q9C075 422 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 POLR3FQ9H1D9 316 aaPredicted RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 C1orf21Q9H246 121 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 HSD3B7Q9H2F3 369 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 PTGES2Q9H7Z7 377 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 ISG20L2Q9H9L3 353 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 NGBQ9NPG2 151 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 UTP6Q9NYH9 597 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 RDH8Q9NYR8 311 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 SPRR3Q9UBC9 169 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 CYTH4Q9UIA0 394 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 MGAT4BQ9UQ53 548 aa2.49□□□□□ -2.01
COPA-204ENST00000481522 ZNF106Q9H2Y7 1883 aaKnown RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 SIPA1L3O60292 1781 aaPredicted RBP2.49□□□□□ -2.01
COPA-204ENST00000481522 SMIM28A0A1B0GU29 152 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms