RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 LGI1O95970 557 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 NUDT7P0C024 238 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 BMP4P12644 408 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 GTF2E2P29084 291 aaKnown RBP13.33□□□□□ -0.28
LIMS3-203ENST00000480744 SELENOPP49908 381 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 DSCR9P59020 149 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 HOXC5Q00444 222 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 ZSWIM7Q19AV6 140 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 NIPAL3Q6P499 406 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 SLC2A7Q6PXP3 512 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 FAM168AQ92567 244 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 MAL2Q969L2 176 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 C3orf49Q96BT1 292 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 FBXO17Q96EF6 278 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 ALKBH3Q96Q83 286 aaPredicted RBP13.33□□□□□ -0.28
LIMS3-203ENST00000480744 KCNS3Q9BQ31 491 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 TMEM45AQ9NWC5 275 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 RPS6KB2Q9UBS0 482 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 IFT52Q9Y366 437 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 CHST2Q9Y4C5 530 aa13.33□□□□□ -0.28
LIMS3-203ENST00000480744 A0A096LPI6 279 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 ELOA3DA6NLF2 546 aaPredicted RBP13.32□□□□□ -0.28
LIMS3-203ENST00000480744 A8MV72 311 aaPredicted RBP13.32□□□□□ -0.28
LIMS3-203ENST00000480744 H7C417 338 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 CLIC1O00299 241 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 VAMP5O95183 116 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 APOBEC3AP31941 199 aaPredicted RBP13.32□□□□□ -0.28
LIMS3-203ENST00000480744 P2RY4P51582 365 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 UBE2NP61088 152 aaKnown RBP13.32□□□□□ -0.28
LIMS3-203ENST00000480744 STX1BP61266 288 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 RGNQ15493 299 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 ELOA3BQ3SY89 546 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 TBRG1Q3YBR2 411 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 HMBOX1Q6NT76 420 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 CREB3L2Q70SY1 520 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 CXXC5Q7LFL8 322 aaKnown RBP13.32□□□□□ -0.28
LIMS3-203ENST00000480744 GOLGA6L1Q8N7Z2 621 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 ELOA3Q8NG57 546 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 OR10H5Q8NGA6 315 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 OR1K1Q8NGR3 316 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 GTF2H4Q92759 462 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 PAIP1Q9H074 479 aaKnown RBP13.32□□□□□ -0.28
LIMS3-203ENST00000480744 PIF1Q9H611 641 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 PRDM4Q9UKN5 801 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 RASD1Q9Y272 281 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 PCDHB14Q9Y5E9 798 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 USH1CQ9Y6N9 552 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 PMF1-BGLAPU3KQ54 211 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 ATRQ13535 2644 aa13.32□□□□□ -0.28
LIMS3-203ENST00000480744 TMEM229AB2RXF0 380 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 LY6HO94772 140 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 PNMTP11086 282 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 RPS5P46782 204 aaKnown RBP13.31□□□□□ -0.28
LIMS3-203ENST00000480744 TUBA1BP68363 451 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 TUBA4AP68366 448 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 TMEM249Q2WGJ8 235 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 TUBA1AQ71U36 451 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 EPHX4Q8IUS5 362 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 KDM8Q8N371 416 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 BBS10Q8TAM1 723 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 STK35Q8TDR2 534 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 SLC38A2Q96QD8 506 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 A4GALTQ9NPC4 353 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 SLCO1B3Q9NPD5 702 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 OBP2BQ9NPH6 170 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 COL6A5A8TX70 2615 aa13.31□□□□□ -0.28
LIMS3-203ENST00000480744 A0A096LNT2 108 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 A0A096LPE4 126 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 IGHV1-18A0A0C4DH31 117 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 A0A1W2PPZ6 126 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 OR6C65A6NJZ3 312 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 NR5A2O00482 541 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 POLR3GO15318 223 aaPredicted RBP13.3□□□□□ -0.28
LIMS3-203ENST00000480744 NPIPB7O75200 414 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 UPK3AO75631 287 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 SLC25A16P16260 332 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 EFNA4P52798 201 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 CLDN17P56750 224 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 IL1RL1Q01638 556 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 FADDQ13158 208 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 CHRFAM7AQ494W8 412 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 C6orf52Q5T4I8 152 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 C1QTNF12Q5T7M4 302 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 EPGNQ6UW88 154 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 LINGO2Q7L985 606 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 HIPK1Q86Z02 1210 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 MFSD8Q8NHS3 518 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 NFKBIDQ8NI38 313 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 KTI12Q96EK9 354 aaPredicted RBP13.3□□□□□ -0.28
LIMS3-203ENST00000480744 PTDSS2Q9BVG9 487 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 BCL2L10Q9HD36 194 aa13.3□□□□□ -0.28
LIMS3-203ENST00000480744 FTCDNL1E5RQL4 147 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 IFNA2P01563 188 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 CRYAAP02489 173 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 CSF3P09919 207 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 ZNF43P17038 809 aa13.29□□□□□ -0.28
LIMS3-203ENST00000480744 SNRPD2P62316 118 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms