RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 A4GALTQ9NPC4 353 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 SPAG4Q9NPE6 437 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 C12orf4Q9NQ89 552 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 AGPAT4Q9NRZ5 378 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-209ENST00000479532 SLC6A13Q9NSD5 602 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 SLC25A37Q9NYZ2 338 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 ADA2Q9NZK5 511 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 PPP4R1LQ9P1A2 415 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 DAPK2Q9UIK4 370 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 SLC13A4Q9UKG4 626 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 POMPQ9Y244 141 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 WIF1Q9Y5W5 379 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 CHCHD2Q9Y6H1 151 aaPredicted RBP5.62□□□□□ -1.51
SF3B1-209ENST00000479532 A3GALT2U3KPV4 340 aa5.62□□□□□ -1.51
SF3B1-209ENST00000479532 PRORSD1PA6NEY8 169 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ZSCAN5BA6NJL1 495 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SAC3D1A6NKF1 404 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 FAM220BPB1ANY3 271 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 H3BML4 177 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 K7EM74 188 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TFECO14948 347 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 KIAA0513O60268 411 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF354AO60765 605 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TMCC2O75069 709 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 BCL10O95999 233 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 DBIP07108 87 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TPRP12270 2363 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 IL7RP16871 459 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TNFRSF1AP19438 455 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 CTSSP25774 331 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 GDF1P27539 372 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 PCGF2P35227 344 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 PTGS2P35354 604 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TALDO1P37837 337 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SERPINB10P48595 397 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 EEFSECP57772 596 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 C17orf67Q0P5P2 114 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TOP3AQ13472 1001 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 GANABQ14697 944 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 CDK10Q15131 360 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TOMM20Q15388 145 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SYPL1Q16563 259 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 EIPR1Q53HC9 387 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SAMD4BQ5PRF9 694 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TYW3Q6IPR3 259 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 REEP3Q6NUK4 255 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF767PQ75MW2 155 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 EIF3MQ7L2H7 374 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 OVCH2Q7RTZ1 564 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 MDGA2Q7Z553 956 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 KRT77Q7Z794 578 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 GALNT10Q86SR1 603 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ZFHX4Q86UP3 3567 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 IGFN1Q86VF2 1251 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 MSRB3Q8IXL7 192 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ELMOD2Q8IZ81 293 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ARL6IP6Q8N6S5 226 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ANKFN1Q8N957 763 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 NUDT10Q8NFP7 164 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 OR2T12Q8NG77 320 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 OR2M7Q8NG81 312 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 OR4K17Q8NGC6 315 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 NFKBIDQ8NI38 313 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ENKURQ8TC29 256 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 DMXL2Q8TDJ6 3036 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SLC26A7Q8TE54 656 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SLC38A5Q8WUX1 472 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SGCDQ92629 289 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 NUDT11Q96G61 164 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM19Q96HH6 336 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 TMEM41AQ96HV5 264 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 KCTD14Q9BQ13 255 aaPredicted RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ANGPTL4Q9BY76 406 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 KAT8Q9H7Z6 458 aaKnown RBP5.61□□□□□ -1.51
SF3B1-209ENST00000479532 EVA1AQ9H8M9 152 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 NEK6Q9HC98 313 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SH2D2AQ9NP31 389 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 AKIP1Q9NQ31 210 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 PPP1R14DQ9NXH3 145 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 KLHL28Q9NXS3 571 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 ENPP5Q9UJA9 477 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 MKLN1Q9UL63 735 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 SLC35A3Q9Y2D2 325 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 CSAG2Q9Y5P2 127 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 KCNE3Q9Y6H6 103 aa5.61□□□□□ -1.51
SF3B1-209ENST00000479532 NPIPA5A0A0B4J1W7 369 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ELOVL7A1L3X0 281 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 SERINC4A6NH21 518 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 FAM171A2A8MVW0 826 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 NPIPA7E9PJI5 369 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 G3V3Y1 287 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 FXYD1O00168 92 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 ZNF264O43296 627 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 FADS1O60427 444 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 EIF4E2O60573 245 aaKnown RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TRIM3O75382 744 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-209ENST00000479532 UGT2B17O75795 530 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 CBR3O75828 277 aa5.6□□□□□ -1.51
SF3B1-209ENST00000479532 TRAPPC6AO75865 159 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms