RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ZER1Q7Z7L7 766 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PLCZ1Q86YW0 608 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 NRMQ8IXM6 262 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 RNF113BQ8IZP6 322 aaKnown RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 PARP8Q8N3A8 854 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PFN4Q8NHR9 129 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 ZNF563Q8TA94 476 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 MAGEE2Q8TD90 523 aaPredicted RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 TMEM239Q8WW34 195 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 HS6ST2Q96MM7 605 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 NPAS1Q99742 590 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 GPA33Q99795 319 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 NIPSNAP1Q9BPW8 284 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TMEM43Q9BTV4 400 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 ADI1Q9BV57 179 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 HES7Q9BYE0 225 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 SLC19A3Q9BZV2 496 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TOR3AQ9H497 397 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 MEPEQ9NQ76 525 aaPredicted RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 PAPOLBQ9NRJ5 636 aaKnown RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 KRT84Q9NSB2 600 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TUBA8Q9NY65 449 aaPredicted RBP6.01□□□□□ -1.45
USP48-208ENST00000479177 SELENONQ9NZV5 590 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 OSGIN1Q9UJX0 560 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 TMEM5Q9Y2B1 443 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 POFUT2Q9Y2G5 429 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 C15orf41Q9Y2V0 281 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 MED31Q9Y3C7 131 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 PCDHGB6Q9Y5F9 930 aa6.01□□□□□ -1.45
USP48-208ENST00000479177 ZFYVE26Q68DK2 2539 aa6□□□□□ -1.45
USP48-208ENST00000479177 A0A087WZY1 265 aa6□□□□□ -1.45
USP48-208ENST00000479177 TMED7-TICAM2A0A0A6YYA0 188 aa6□□□□□ -1.45
USP48-208ENST00000479177 MED19A0JLT2 244 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 TMEM72A0PK05 275 aa6□□□□□ -1.45
USP48-208ENST00000479177 ENO4A6NNW6 628 aa6□□□□□ -1.45
USP48-208ENST00000479177 FAM47E-STBD1D6RA91 191 aa6□□□□□ -1.45
USP48-208ENST00000479177 E9PQ18 207 aa6□□□□□ -1.45
USP48-208ENST00000479177 KPNA4O00629 521 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 NPIPB7O75200 414 aa6□□□□□ -1.45
USP48-208ENST00000479177 IGF2P01344 180 aa6□□□□□ -1.45
USP48-208ENST00000479177 GASTP01350 101 aa6□□□□□ -1.45
USP48-208ENST00000479177 POU2F1P14859 743 aa6□□□□□ -1.45
USP48-208ENST00000479177 CDH2P19022 906 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 MAKP20794 623 aa6□□□□□ -1.45
USP48-208ENST00000479177 CNR1P21554 472 aa6□□□□□ -1.45
USP48-208ENST00000479177 CAPGP40121 348 aa6□□□□□ -1.45
USP48-208ENST00000479177 GPR4P46093 362 aa6□□□□□ -1.45
USP48-208ENST00000479177 HTR3AP46098 478 aa6□□□□□ -1.45
USP48-208ENST00000479177 RAD23AP54725 363 aa6□□□□□ -1.45
USP48-208ENST00000479177 UCNP55089 124 aa6□□□□□ -1.45
USP48-208ENST00000479177 CTBP2P56545 445 aa6□□□□□ -1.45
USP48-208ENST00000479177 DSCR4P56555 118 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 GPR85P60893 370 aa6□□□□□ -1.45
USP48-208ENST00000479177 ARG2P78540 354 aa6□□□□□ -1.45
USP48-208ENST00000479177 ADARB1P78563 741 aaKnown RBP6□□□□□ -1.45
USP48-208ENST00000479177 PRKCDQ05655 676 aa6□□□□□ -1.45
USP48-208ENST00000479177 TSPAN31Q12999 210 aa6□□□□□ -1.45
USP48-208ENST00000479177 TMEM44Q2T9K0 475 aa6□□□□□ -1.45
USP48-208ENST00000479177 ZIK1Q3SY52 487 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 CMPK2Q5EBM0 449 aa6□□□□□ -1.45
USP48-208ENST00000479177 C6orf52Q5T4I8 152 aa6□□□□□ -1.45
USP48-208ENST00000479177 BROXQ5VW32 411 aa6□□□□□ -1.45
USP48-208ENST00000479177 SLC25A25Q6KCM7 469 aa6□□□□□ -1.45
USP48-208ENST00000479177 KLHL17Q6TDP4 642 aa6□□□□□ -1.45
USP48-208ENST00000479177 UNQ6494/PRO21346Q6UXR6 183 aa6□□□□□ -1.45
USP48-208ENST00000479177 SLC46A3Q7Z3Q1 461 aa6□□□□□ -1.45
USP48-208ENST00000479177 GALNT5Q7Z7M9 940 aa6□□□□□ -1.45
USP48-208ENST00000479177 MEX3DQ86XN8 651 aaKnown RBP6□□□□□ -1.45
USP48-208ENST00000479177 P3H2Q8IVL5 708 aa6□□□□□ -1.45
USP48-208ENST00000479177 CHERPQ8IWX8 916 aaKnown RBP6□□□□□ -1.45
USP48-208ENST00000479177 GTPBP8Q8N3Z3 284 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 OR2M7Q8NG81 312 aa6□□□□□ -1.45
USP48-208ENST00000479177 OR1J4Q8NGS1 313 aa6□□□□□ -1.45
USP48-208ENST00000479177 POC1BQ8TC44 478 aa6□□□□□ -1.45
USP48-208ENST00000479177 GNPDA2Q8TDQ7 276 aa6□□□□□ -1.45
USP48-208ENST00000479177 TMEM234Q8WY98 164 aa6□□□□□ -1.45
USP48-208ENST00000479177 TFAP2CQ92754 450 aa6□□□□□ -1.45
USP48-208ENST00000479177 HAS2Q92819 552 aa6□□□□□ -1.45
USP48-208ENST00000479177 ZBTB8AQ96BR9 441 aa6□□□□□ -1.45
USP48-208ENST00000479177 SCMH1Q96GD3 660 aa6□□□□□ -1.45
USP48-208ENST00000479177 MRGPRX4Q96LA9 322 aa6□□□□□ -1.45
USP48-208ENST00000479177 CCDC140Q96MF4 163 aa6□□□□□ -1.45
USP48-208ENST00000479177 JSRP1Q96MG2 331 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 C5orf34Q96MH7 638 aa6□□□□□ -1.45
USP48-208ENST00000479177 PITX2Q99697 317 aa6□□□□□ -1.45
USP48-208ENST00000479177 SMAD5Q99717 465 aaKnown RBP6□□□□□ -1.45
USP48-208ENST00000479177 FAM173AQ9BQD7 235 aa6□□□□□ -1.45
USP48-208ENST00000479177 UCK2Q9BZX2 261 aa6□□□□□ -1.45
USP48-208ENST00000479177 UBQLN3Q9H347 655 aa6□□□□□ -1.45
USP48-208ENST00000479177 RIBC2Q9H4K1 309 aa6□□□□□ -1.45
USP48-208ENST00000479177 PTGES2Q9H7Z7 377 aa6□□□□□ -1.45
USP48-208ENST00000479177 ZNF556Q9HAH1 456 aa6□□□□□ -1.45
USP48-208ENST00000479177 KRCC1Q9NPI7 259 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 C20orf141Q9NUB4 165 aa6□□□□□ -1.45
USP48-208ENST00000479177 DKKL1Q9UK85 242 aa6□□□□□ -1.45
USP48-208ENST00000479177 RAB26Q9ULW5 256 aa6□□□□□ -1.45
USP48-208ENST00000479177 BOKQ9UMX3 212 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 VDAC3Q9Y277 283 aa6□□□□□ -1.45
USP48-208ENST00000479177 KLF13Q9Y2Y9 288 aaPredicted RBP6□□□□□ -1.45
USP48-208ENST00000479177 TMED7Q9Y3B3 224 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms