RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 IL17CQ9P0M4 197 aa5.03□□□□□ -1.6
SSR3-207ENST00000478842 FBN1P35555 2871 aaKnown RBP5.03□□□□□ -1.6
SSR3-207ENST00000478842 HRNRQ86YZ3 2850 aaPredicted RBP5.03□□□□□ -1.6
SSR3-207ENST00000478842 PHF3Q92576 2039 aaKnown RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 JMJD1CQ15652 2540 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 INTS1Q8N201 2190 aaKnown RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 STAB1Q9NY15 2570 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 IGLV3-12A0A075B6K2 115 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 IGHV1-45A0A0A0MS14 117 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 PMS2P5A8MQ11 134 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 IDSB3KWA1 339 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 GOLGA8MH3BSY2 632 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 NDC80O14777 642 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 PSMD3O43242 534 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CTAG2O75638 210 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 TOXO94900 526 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SLC4A1P02730 911 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ABHD2P08910 425 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 RALBP11234 206 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 COX6A1P12074 109 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ABOP16442 354 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CXCR2P25025 360 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CHRNB4P30926 498 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SFTPDP35247 375 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CDKN1AP38936 164 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 PRLHRP49683 370 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 PLTPP55058 493 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CRADDP78560 199 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 XIAPP98170 497 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CALCOCO2Q13137 446 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 PRPSAP1Q14558 356 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 OPCMLQ14982 345 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CEBPEQ15744 281 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SMU1Q2TAY7 513 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 DEFB110Q30KQ9 67 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ZNF658BQ4V348 819 aaPredicted RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 BEND6Q5SZJ8 279 aaPredicted RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.02□□□□□ -1.61
SSR3-207ENST00000478842 UGT3A1Q6NUS8 523 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 H3F3CQ6NXT2 135 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 PRMT9Q6P2P2 845 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 EMBQ6PCB8 327 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CNSTQ6PJW8 725 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 FAM151BQ6UXP7 276 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SHISA6Q6ZSJ9 500 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SH2D5Q6ZV89 423 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 GPR141Q7Z602 305 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 LINC00523Q86TU6 105 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 NR2C2APQ86WQ0 139 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CNTN4Q8IWV2 1026 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 IFT20Q8IY31 132 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 KIRREL3Q8IZU9 778 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CLYBLQ8N0X4 340 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 C10orf53Q8N6V4 93 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 HPSE2Q8WWQ2 592 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ANKRD7Q92527 254 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 DYRK2Q92630 601 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 TFGQ92734 400 aaPredicted RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 LRRC39Q96DD0 335 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SENP5Q96HI0 755 aaPredicted RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 DNAJC1Q96KC8 554 aaKnown RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 C4orf45Q96LM5 186 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ZNF285Q96NJ3 590 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 EBNA1BP2Q99848 306 aaKnown RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 CDC42EP4Q9H3Q1 356 aaKnown RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 CUTCQ9NTM9 273 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 INTS9Q9NV88 658 aaKnown RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 CTSFQ9UBX1 484 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ZNF282Q9UDV7 671 aaPredicted RBP5.02□□□□□ -1.61
SSR3-207ENST00000478842 SLC2A6Q9UGQ3 507 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 ARL5AQ9Y689 179 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 SCN2AQ99250 2005 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 CSPG4Q6UVK1 2322 aa5.02□□□□□ -1.61
SSR3-207ENST00000478842 UQCRHLA0A096LP55 91 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 TRBV5-4A0A0C4DH59 114 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 TCRBV9S1A1TA0A576 114 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 FAM159BA6NKW6 160 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 NPIPA5E9PKD4 350 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 NPIPA3F8WFD2 350 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 SRPX2O60687 465 aaPredicted RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 RAD51DO75771 328 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 UQCRHP07919 91 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 ATP1B2P14415 290 aaPredicted RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 HOXB6P17509 224 aaKnown RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 PGAM1P18669 254 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 GCAP28676 217 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 FOXN2P32314 431 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 PEX19P40855 299 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 ELK3P41970 407 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 FRKP42685 505 aaPredicted RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 IER3P46695 156 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 NPBWR1P48145 328 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 LINC01547P58512 204 aaPredicted RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 STX1BP61266 288 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 ZNF33BQ06732 778 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 PDIA2Q13087 525 aaKnown RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 POU6F1Q14863 301 aa5.01□□□□□ -1.61
SSR3-207ENST00000478842 TAF1AQ15573 450 aaPredicted RBP5.01□□□□□ -1.61
SSR3-207ENST00000478842 DNAJC21Q5F1R6 531 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms