RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TADA1Q96BN2 335 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF707Q96C28 371 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 MSANTD3Q96H12 275 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 TXN2Q99757 166 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 TCHPQ9BT92 498 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 TMEM121Q9BTD3 319 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 HCAR1Q9BXC0 346 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 GSDMCQ9BYG8 508 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 POLR1EQ9GZS1 481 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 OPN3Q9H1Y3 402 aaPredicted RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 RMND5AQ9H871 391 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ELOVL2Q9NXB9 296 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 MRPL39Q9NYK5 338 aaKnown RBP3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 DHRS4-AS1Q9P1J3 65 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ARMCX1Q9P291 453 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 ATP6V1DQ9Y5K8 247 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPACA6W5XKT8 324 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM186AA6NE01 2351 aa3.08□□□□□ -1.92
CDC42BPA-212ENST00000478573 IGLV3-10A0A075B6K4 115 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 PVALEFA0A1B0GWK0 134 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 E9PAM4 449 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 CASKO14936 926 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 SRPX2O60687 465 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF253O75346 499 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 TRIM3O75382 744 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 NT5EP21589 574 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 NMT1P30419 496 aaKnown RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 RPL4P36578 427 aaKnown RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 TNFSF9P41273 254 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 HTR4Q13639 388 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ATXN7L3Q14CW9 347 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 PDK4Q16654 411 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 CYP51A1Q16850 503 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 TPD52L1Q16890 204 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ANKDD1AQ495B1 522 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 RABGAP1LQ5R372 815 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 FAM173BQ6P4H8 233 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 GCNT7Q6ZNI0 430 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRRC70Q7Z2Q7 622 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 IFNEQ86WN2 208 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 TMEM86AQ8N2M4 240 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 GPD1LQ8N335 351 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 BPIFB2Q8N4F0 458 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF461Q8TAF7 563 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPPL2BQ8TCT7 592 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 VN1R17PQ8TDU5 208 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPRYD4Q8WW59 207 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ANKRD36BP1Q96IX9 119 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 MCCC1Q96RQ3 725 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 PLIN2Q99541 437 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ERP44Q9BS26 406 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 CRACR2AQ9BSW2 395 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 TIGARQ9NQ88 270 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 UTP6Q9NYH9 597 aaKnown RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 RBAKQ9NYW8 714 aaPredicted RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 CRLS1Q9UJA2 301 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ANAPC7Q9UJX3 599 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 GSTK1Q9Y2Q3 226 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 MRPS7Q9Y2R9 242 aaKnown RBP3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 ASB3Q9Y575 518 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 PIEZO1Q92508 2521 aa3.07□□□□□ -1.92
CDC42BPA-212ENST00000478573 TRAV9-2A0A087WT02 112 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZSCAN5CA6NGD5 496 aaPredicted RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZSCAN5BA6NJL1 495 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 A8MUI8 341 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ANKRD63C9JTQ0 380 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PIRO00625 290 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 DYNC1I1O14576 645 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PRRG1O14668 218 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 XPO1O14980 1071 aaKnown RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CCL16O15467 120 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 POLR2DO15514 142 aaKnown RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PHF1O43189 567 aaPredicted RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 KLRC4O43908 158 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZFC3H1O60293 1989 aaKnown RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ZNF354AO60765 605 aaPredicted RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PLXNA2O75051 1894 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 N4BP1O75113 896 aaKnown RBP3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 ECI2O75521 394 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 SPAG6O75602 509 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 TNNC2P02585 160 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CLUP10909 449 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 LAMP1P11279 417 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 TPSB2P20231 275 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 TBXA2RP21731 343 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CMA1P23946 247 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 IFNAR2P48551 515 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 AP3M2P53677 418 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 RND3P61587 244 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 NTHL1P78549 312 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 BDH1Q02338 343 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 IL18R1Q13478 541 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 DPYSL3Q14195 570 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 TPSAB1Q15661 275 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 CACNA1EQ15878 2313 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 LRRK1Q38SD2 2015 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 SLC25A30Q5SVS4 291 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 MEDAGQ5VYS4 303 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 RNLSQ5VYX0 342 aa3.06□□□□□ -1.92
CDC42BPA-212ENST00000478573 PVRIGQ6DKI7 326 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms