RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ELOA3Q8NG57 546 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 RADILQ96JH8 1075 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 SLCO5A1Q9H2Y9 848 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 CXorf56Q9H5V9 222 aa20.59■□□□□ 0.89
C9orf3-215ENST00000478473 A0A087WUJ7 227 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 A0A0B4J2E0 115 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 A0A1B0GX12 115 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 CIB4A0PJX0 185 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 OR6C65A6NJZ3 312 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 FMO6PO60774 539 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 LGI1O95970 557 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 NPPAP01160 153 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 TROVE2P10155 538 aaKnown RBP eCLIP20.58■□□□□ 0.893e-7■■□□□ 13.3
C9orf3-215ENST00000478473 PTH2RP49190 550 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 MTPNP58546 118 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 NFYCQ13952 458 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 ALG10BQ5I7T1 473 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 FAM69AQ5T7M9 428 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 CGB2Q6NT52 195 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 AAED1Q7RTV5 226 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 EPHX4Q8IUS5 362 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 WDR31Q8NA23 367 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 FBXW5Q969U6 566 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 KTI12Q96EK9 354 aaPredicted RBP20.58■□□□□ 0.89
C9orf3-215ENST00000478473 SLC47A1Q96FL8 570 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 C18orf12Q96KH6 178 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 WFDC6Q9BQY6 131 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 UPB1Q9UBR1 384 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 RPS6KB2Q9UBS0 482 aa20.58■□□□□ 0.89
C9orf3-215ENST00000478473 USF3Q68DE3 2245 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 CCT8L1PA6NM43 557 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 SHISA9B4DS77 424 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 PTAFRP25105 342 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 RGS8P57771 180 aaPredicted RBP20.57■□□□□ 0.88
C9orf3-215ENST00000478473 TGFBR3Q03167 851 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 TRMT5Q32P41 509 aaKnown RBP20.57■□□□□ 0.88
C9orf3-215ENST00000478473 ALKBH2Q6NS38 261 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 ADPRHL1Q8NDY3 354 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 KBTBD8Q8NFY9 601 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 SLC41A3Q96GZ6 507 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 ARHGDIGQ99819 225 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 LINC00470Q9BZP3 86 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 SLC17A5Q9NRA2 495 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 FGFR1OP2Q9NVK5 253 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 B3GAT1Q9P2W7 334 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 MGAT4BQ9UQ53 548 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 RCE1Q9Y256 329 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 B3GALT5Q9Y2C3 310 aa20.57■□□□□ 0.88
C9orf3-215ENST00000478473 TRAV36DV7A0A075B6V5 113 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 FXYD1O00168 92 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 CLOCKO15516 846 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 AQP1P29972 269 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 PCGF2P35227 344 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 RPS5P46782 204 aaKnown RBP20.56■□□□□ 0.88
C9orf3-215ENST00000478473 OR1Q1Q15612 314 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 NRF1Q16656 503 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 DUSP7Q16829 419 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 CYP51A1Q16850 503 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 PGGHGQ32M88 737 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 TMEM108Q6UXF1 575 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 LINC00114Q6XXX2 140 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 CCDC80Q76M96 950 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 ABHD12BQ7Z5M8 362 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-215ENST00000478473 PATL1Q86TB9 770 aaKnown RBP20.56■□□□□ 0.88
C9orf3-215ENST00000478473 BIVMQ86UB2 503 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 GPAT4Q86UL3 456 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 ANKK1Q8NFD2 765 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 GPR32P1Q8NGA4 272 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 SMAP2Q8WU79 429 aaPredicted RBP20.56■□□□□ 0.88
C9orf3-215ENST00000478473 TAAR8Q969N4 342 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 PRR14Q9BWN1 585 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 TMEM27Q9HBJ8 222 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 SAR1AQ9NR31 198 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 KLHL14Q9P2G3 628 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 AMDHD2Q9Y303 409 aa20.56■□□□□ 0.88
C9orf3-215ENST00000478473 M0QX08 132 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 ZNF432O94892 652 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 SOD3P08294 240 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 ARFIP2P53365 341 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 RPS4XP62701 263 aaKnown RBP20.55■□□□□ 0.88
C9orf3-215ENST00000478473 MFSD13AQ14CX5 517 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 NANOGP8Q6NSW7 305 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 ZNF613Q6PF04 617 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 YTHDF3Q7Z739 585 aaKnown RBP20.55■□□□□ 0.88
C9orf3-215ENST00000478473 DTX2Q86UW9 622 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 CALHM3Q86XJ0 350 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 OR8J3Q8NGG0 315 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 OR52N5Q8NH56 324 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 NEUROG1Q92886 237 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 PERPQ96FX8 193 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 COX4I2Q96KJ9 171 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 OXGR1Q96P68 337 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 ZNF317Q96PQ6 595 aaPredicted RBP20.55■□□□□ 0.88
C9orf3-215ENST00000478473 TMEM43Q9BTV4 400 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 NANOGQ9H9S0 305 aa20.55■□□□□ 0.88
C9orf3-215ENST00000478473 PLCE1Q9P212 2302 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 BBIP1A8MTZ0 92 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 AIM2O14862 343 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 PAX7P23759 505 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 CD40P25942 277 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms