RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 CTU2Q2VPK5 515 aaKnown RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ARHGAP11BQ3KRB8 267 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 PFN4Q8NHR9 129 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 MFSD8Q8NHS3 518 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ARL6Q9H0F7 186 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 RANBP3Q9H6Z4 567 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 C12orf4Q9NQ89 552 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 TXNL4BQ9NX01 149 aaKnown RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 RIF1Q5UIP0 2472 aaKnown RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 CDHR4A6H8M9 788 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 F10P00742 488 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 SSR4P51571 173 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 ARL6IP1Q15041 203 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 C5orf46Q6UWT4 87 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 DPY19L2P2Q6ZN68 376 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 LRRC28Q86X40 367 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 OR1J4Q8NGS1 313 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 OR2T35Q8NGX2 323 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 SYNPRQ8TBG9 265 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 MNTQ99583 582 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 NXF5Q9H1B4 397 aaKnown RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 FN3KQ9H479 309 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 BCL2L10Q9HD36 194 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 OR2S2Q9NQN1 319 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 BOKQ9UMX3 212 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-208ENST00000478423 MOKQ9UQ07 419 aa13.12□□□□□ -0.31
NPHP4-208ENST00000478423 F5H0A9 414 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 NCR1O76036 304 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 SLC22A6Q4U2R8 563 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 TMEM179BQ7Z7N9 219 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 TPRA1Q86W33 373 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF547Q8IVP9 402 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 RIMKLAQ8IXN7 391 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 BEST3Q8N1M1 668 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 KDM8Q8N371 416 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 TBC1D15Q8TC07 691 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 CDH20Q9HBT6 801 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 METTL12A8MUP2 240 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 KCNK2O95069 426 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF35P13682 527 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 EPHA2P29317 976 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 SHC1P29353 583 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 SNRPGP62308 76 aaKnown RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 SFTPA1Q8IWL2 248 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 TSLPQ969D9 159 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 RASD2Q96D21 266 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 MAB21L2Q9Y586 359 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 ASPDHA6ND91 283 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 MEIS3P1A6NDR6 274 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 A8MVM7 634 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 FOXK1P85037 733 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 IHHQ14623 411 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 TMEM201Q5SNT2 666 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 FAM69AQ5T7M9 428 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 DHRS4L2Q6PKH6 230 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 MRPL21Q7Z2W9 205 aaKnown RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 C16orf52Q8NHV5 167 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 ASB17Q8WXJ9 295 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 ZNF566Q969W8 418 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 MBOAT4Q96T53 435 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 WSB2Q9NYS7 404 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 NRXN2Q9P2S2 1712 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 OR2W5A6NFC9 320 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 LMO7DNF2Z398 122 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 CSO75390 466 aaKnown RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 S100A9P06702 114 aaKnown RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 MELKQ14680 651 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 PLEKHN1Q494U1 663 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 FCRLAQ7L513 359 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 SYT13Q7L8C5 426 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 CAMKMTQ7Z624 323 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 TP53I13Q8NBR0 393 aaPredicted RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 NANOS1Q8WY41 292 aaKnown RBP13.11□□□□□ -0.31
NPHP4-208ENST00000478423 CSF3RQ99062 836 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 ABRACLQ9P1F3 81 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 WASF3Q9UPY6 502 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 NPFFR2Q9Y5X5 522 aa13.11□□□□□ -0.31
NPHP4-208ENST00000478423 DIRAS3O95661 229 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 CLDN12P56749 244 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 SF3A2Q15428 464 aaKnown RBP13.1□□□□□ -0.31
NPHP4-208ENST00000478423 ADPRMQ3LIE5 342 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 SSX6Q7RTT6 188 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 OR51T1Q8NGJ9 327 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 OR5H2Q8NGV7 314 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 ENKD1Q9H0I2 346 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 ANKRD10Q9NXR5 420 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 PCM1Q15154 2024 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 NOTOA8MTQ0 251 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 GAPDHSO14556 408 aaPredicted RBP13.1□□□□□ -0.31
NPHP4-208ENST00000478423 S100A6P06703 90 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 JUNBP17275 347 aaPredicted RBP13.1□□□□□ -0.31
NPHP4-208ENST00000478423 RELAQ04206 551 aa13.1□□□□□ -0.31
NPHP4-208ENST00000478423 DUSP8Q13202 625 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms