RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 NEBP20929 6669 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 TNCP24821 2201 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 HERC1Q15751 4861 aa-0.5□□□□□ -2.49
CALD1-218ENST00000478075 IGKV1D-8A0A087WSZ0 117 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 ZNF320A2RRD8 509 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 H3BNH8 94 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 KIF2AO00139 706 aaPredicted RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 POLR1CO15160 346 aaPredicted RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 WDR62O43379 1518 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 NME2P1O60361 137 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 ASGR1P07306 291 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 HBQ1P09105 142 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 INAFM2P0DMQ5 153 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 IGHV3-43DP0DP04 118 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 AKR1B1P15121 316 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 IL1RNP18510 177 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 MSR1P21757 451 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 COPB2P35606 906 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 ATXN3P54252 364 aaPredicted RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 IFT88Q13099 833 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 LAGE3Q14657 143 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 CACNA1EQ15878 2313 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 HNRNPA1L2Q32P51 320 aaKnown RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 HES5Q5TA89 166 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 WDR59Q6PJI9 974 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 CCDC137Q6PK04 289 aaKnown RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 FAM47EQ6ZV65 393 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 LILRB4Q8NHJ6 448 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 TSKUQ8WUA8 353 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 DUS3LQ96G46 650 aaKnown RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 SDSLQ96GA7 329 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 AMDHD1Q96NU7 426 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 CHMP4AQ9BY43 222 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 TMEM206Q9H813 350 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 DNAJC17Q9NVM6 304 aaKnown RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 ATP6V1HQ9UI12 483 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 CYTH4Q9UIA0 394 aa-0.51□□□□□ -2.49
CALD1-218ENST00000478075 F11RQ9Y624 299 aaKnown RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 NSD1Q96L73 2696 aaPredicted RBP-0.51□□□□□ -2.49
CALD1-218ENST00000478075 NAV3Q8IVL0 2385 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 LAMB4A4D0S4 1761 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 FLNCQ14315 2725 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 C5orf51A6NDU8 294 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 ZNF716A6NP11 495 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 H3BMQ9 156 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 BPY2O14599 106 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CCDC22O60826 627 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 APCSP02743 223 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 ZNF735P0CB33 412 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 ZNF35P13682 527 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 FOLR1P15328 257 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 FERP16591 822 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CMA1P23946 247 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CALCRP30988 508 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 BTCP35070 178 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 SERPINB6P35237 376 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CYB561P49447 251 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CCL11P51671 97 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 SCN1BQ07699 218 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 RIPK1Q13546 671 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 PTK6Q13882 451 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CYTH1Q15438 398 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 PYDC2Q56P42 97 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 RPUSD3Q6P087 351 aaKnown RBP-0.52□□□□□ -2.49
CALD1-218ENST00000478075 TRAT1Q6PIZ9 186 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CES3Q6UWW8 571 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 B3GLCTQ6Y288 498 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 TMEM184AQ6ZMB5 413 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 Q6ZRN7 208 aaPredicted RBP-0.52□□□□□ -2.49
CALD1-218ENST00000478075 C15orf54Q8N8G6 183 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 BLNKQ8WV28 456 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 ST8SIA1Q92185 356 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 PEX13Q92968 403 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CCNL2Q96S94 520 aaPredicted RBP-0.52□□□□□ -2.49
CALD1-218ENST00000478075 HSPB9Q9BQS6 159 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 NAT9Q9BTE0 207 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 CRNKL1Q9BZJ0 848 aaKnown RBP-0.52□□□□□ -2.49
CALD1-218ENST00000478075 NAT10Q9H0A0 1025 aaKnown RBP-0.52□□□□□ -2.49
CALD1-218ENST00000478075 QPCTLQ9NXS2 382 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 ABCA4P78363 2273 aa-0.52□□□□□ -2.49
CALD1-218ENST00000478075 HIVEP3Q5T1R4 2406 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 IGSF10Q6WRI0 2623 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 DLG5Q8TDM6 1919 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 IGHV3-74A0A0B4J1X5 117 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 IGKV1-6A0A0C4DH72 117 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 CENPVL3A0A0U1RRI6 287 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 C12orf71A8MTZ7 269 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 E7ESA3 106 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 H3BTX0 84 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 STX11O75558 287 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 UGT2B17O75795 530 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 CLUP10909 449 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 SHMT2P34897 504 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 G6PCP35575 357 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 HTR5AP47898 357 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 CASP9P55211 416 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 CTAG1AP78358 180 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 RGS1Q08116 209 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 RIPPLY1Q0D2K3 151 aa-0.53□□□□□ -2.49
CALD1-218ENST00000478075 CIRBPQ14011 172 aaKnown RBP-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms