RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	KBTBD8	Q8NFY9	601 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	SMAP2	Q8WU79	429 aa	Predicted RBP	12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	SLC38A4	Q969I6	547 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	KTI12	Q96EK9	354 aa	Predicted RBP	12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	SLC47A1	Q96FL8	570 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	RADIL	Q96JH8	1075 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937		Q96MF0	132 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	BDH2	Q9BUT1	245 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	PTDSS2	Q9BVG9	487 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	SLCO5A1	Q9H2Y9	848 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	ZNF701	Q9NV72	531 aa	Predicted RBP	12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	NPAP1	Q9NZP6	1156 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	TES	Q9UGI8	421 aa	Known RBP	12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	MGAT4B	Q9UQ53	548 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	SLC25A15	Q9Y619	301 aa		12.14	□□□□□ -0.47
HDAC7-222	ENST00000477937	VPS13C	Q709C8	3753 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937		A0A1W2PR80	420 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	OR6C65	A6NJZ3	312 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	FTCDNL1	E5RQL4	147 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	ABCD4	O14678	606 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	INHBB	P09529	407 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	DANCR	P0C864	163 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	PTAFR	P25105	342 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	ZNF83	P51522	516 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	ARFIP2	P53365	341 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	DMTN	Q08495	405 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	SELPLG	Q14242	412 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	OR1Q1	Q15612	314 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	C1QTNF12	Q5T7M4	302 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	FAM69A	Q5T7M9	428 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	NET1	Q7Z628	596 aa	Predicted RBP	12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	BIVM	Q86UB2	503 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	C17orf78	Q8N4C9	275 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	RNF217	Q8TC41	542 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	NEUROG1	Q92886	237 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	TAAR8	Q969N4	342 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	PRR14	Q9BWN1	585 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	AMBRA1	Q9C0C7	1298 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	KAT8	Q9H7Z6	458 aa	Known RBP	12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	FGFR1OP2	Q9NVK5	253 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	CISD1	Q9NZ45	108 aa	Known RBP	12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	AMDHD2	Q9Y303	409 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	ACAN	P16112	2415 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	USF3	Q68DE3	2245 aa		12.13	□□□□□ -0.47
HDAC7-222	ENST00000477937	TRAV36DV7	A0A075B6V5	113 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937		A0A087WUJ7	227 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	SHISA9	B4DS77	424 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937		M0QX08	132 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	C8B	P07358	591 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	VIM	P08670	466 aa	Known RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	ZNF43	P17038	809 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	CDH2	P19022	906 aa	Predicted RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	ATP5J2	P56134	94 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	PCBP3	P57721	371 aa	Known RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	CYLC2	Q14093	348 aa	Predicted RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	MMEL1	Q495T6	779 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	HSP90B2P	Q58FF3	399 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	NIPAL3	Q6P499	406 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	EPHX4	Q8IUS5	362 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	DEPDC4	Q8N2C3	294 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	SMYD1	Q8NB12	490 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	OR10A6	Q8NH74	314 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	TRMT61A	Q96FX7	289 aa	Known RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	OXGR1	Q96P68	337 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	SH3GL1	Q99961	368 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	GSX1	Q9H4S2	264 aa	Predicted RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	SLC17A5	Q9NRA2	495 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	FAIM	Q9NVQ4	179 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	ZNF446	Q9NWS9	450 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	MAGED1	Q9Y5V3	778 aa	Predicted RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	FLNA	P21333	2647 aa	Known RBP	12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	C2CD3	Q4AC94	2353 aa		12.12	□□□□□ -0.47
HDAC7-222	ENST00000477937	ZNF587B	E7ETH6	402 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937		M0R1B8	84 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	OVOL3	O00110	214 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	FBP2	O00757	339 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	AIM2	O14862	343 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	TPST2	O60704	377 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	LGI1	O95970	557 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	WNT11	O96014	354 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	OPN1SW	P03999	348 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	SOD3	P08294	240 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	CD40	P25942	277 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	SELENOP	P49908	381 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	CDH11	P55287	796 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	CDH12	P55289	794 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	PRPS1	P60891	318 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	IL1RL1	Q01638	556 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	C1D	Q13901	141 aa	Known RBP	12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	MFSD13A	Q14CX5	517 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	DUSP7	Q16829	419 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	TRMT5	Q32P41	509 aa	Known RBP	12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	INTS11	Q5TA45	600 aa	Known RBP	12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	SLC22A25	Q6T423	547 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	KLHL24	Q6TFL4	600 aa		12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	H1FNT	Q75WM6	255 aa	Predicted RBP	12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	PATL1	Q86TB9	770 aa	Known RBP	12.11	□□□□□ -0.47
HDAC7-222	ENST00000477937	KDM8	Q8N371	416 aa		12.11	□□□□□ -0.47

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