RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ZNF229Q9UJW7 825 aa17.8■□□□□ 0.44
ACTB-210ENST00000477812 CORINQ9Y5Q5 1042 aa17.8■□□□□ 0.44
ACTB-210ENST00000477812 MED12LQ86YW9 2145 aa17.8■□□□□ 0.44
ACTB-210ENST00000477812 A0A1B0GUH1 482 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 ZNF716A6NP11 495 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 CCL21O00585 134 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 DEAF1O75398 565 aaPredicted RBP17.79■□□□□ 0.44
ACTB-210ENST00000477812 LDLRP01130 860 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 FCGR1AP12314 374 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 CBLP22681 906 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 FHL1Q13642 323 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 LAPTM4AQ15012 233 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 OTUD3Q5T2D3 398 aaPredicted RBP17.79■□□□□ 0.44
ACTB-210ENST00000477812 RIPPLY2Q5TAB7 128 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 MAMDC2Q7Z304 686 aaPredicted RBP17.79■□□□□ 0.44
ACTB-210ENST00000477812 ZER1Q7Z7L7 766 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 CCDC103Q8IW40 242 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 C10orf67Q8IYJ2 551 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 NAXEQ8NCW5 288 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 LRTOMTQ8WZ04 291 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 ZHX1-C8orf76Q96EF9 292 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 GPA33Q99795 319 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 TM9SF2Q99805 663 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 CHST11Q9NPF2 352 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 B3GAT1Q9P2W7 334 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 TMCC3Q9ULS5 477 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 B3GALT5Q9Y2C3 310 aa17.79■□□□□ 0.44
ACTB-210ENST00000477812 IGKV3D-15A0A087WSY6 115 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 CDC42EP2O14613 210 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 LRRTM2O43300 516 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 RCBTB2O95199 551 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 TSPAN19P0C672 248 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 FUT1P19526 365 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 FASP25445 335 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 DNAJA1P31689 397 aaKnown RBP17.78■□□□□ 0.44
ACTB-210ENST00000477812 GPR4P46093 362 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 SLC16A1P53985 500 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 RPS4XP62701 263 aaKnown RBP17.78■□□□□ 0.44
ACTB-210ENST00000477812 PMPCAQ10713 525 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 PDK3Q15120 406 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 MICAQ29983 383 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 PGBD2Q6P3X8 592 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 H1FNTQ75WM6 255 aaPredicted RBP17.78■□□□□ 0.44
ACTB-210ENST00000477812 ZNF771Q7L3S4 317 aaPredicted RBP17.78■□□□□ 0.44
ACTB-210ENST00000477812 FJX1Q86VR8 437 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 SLC43A2Q8N370 569 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 C10orf53Q8N6V4 93 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 OR9Q2Q8NGE9 314 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 PIGXQ8TBF5 258 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 FAM46AQ96IP4 442 aaKnown RBP17.78■□□□□ 0.44
ACTB-210ENST00000477812 PSD2Q9BQI7 771 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 GP6Q9HCN6 339 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 NANSQ9NR45 359 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 TMEM5Q9Y2B1 443 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 FLNCQ14315 2725 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 MYO7BQ6PIF6 2116 aa17.78■□□□□ 0.44
ACTB-210ENST00000477812 NCOA6Q14686 2063 aaPredicted RBP17.77■□□□□ 0.44
ACTB-210ENST00000477812 A0A1W2PNV4 684 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 ARRDC5A6NEK1 342 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 PLPP3O14495 311 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 SS18L1O75177 396 aaPredicted RBP17.77■□□□□ 0.44
ACTB-210ENST00000477812 CCNB2O95067 398 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 HPRP00739 348 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 ADORA2A-AS1P86434 159 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 SLC17A1Q14916 467 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 RNPS1Q15287 305 aaKnown RBP17.77■□□□□ 0.44
ACTB-210ENST00000477812 PPP4R4Q6NUP7 873 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 C1orf94Q6P1W5 598 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 P4HA3Q7Z4N8 544 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 AMIGO2Q86SJ2 522 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 OR5J2Q8NH18 312 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 CCDC120Q96HB5 630 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 ZFP3Q96NJ6 502 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 PKP2Q99959 881 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 NAA11Q9BSU3 229 aaPredicted RBP17.77■□□□□ 0.44
ACTB-210ENST00000477812 ASPNQ9BXN1 380 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 BCO1Q9HAY6 547 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 FANCFQ9NPI8 374 aa17.77■□□□□ 0.44
ACTB-210ENST00000477812 ERRFI1Q9UJM3 462 aaPredicted RBP17.77■□□□□ 0.44
ACTB-210ENST00000477812 PCNX1Q96RV3 2341 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 A0A0G2JNJ9 132 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 LOC102725191A0A1B0GVB3 256 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 EFCAB9A8MZ26 197 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 MS4A18H0YCH9 400 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 J3QKU1 62 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 GNGT2O14610 69 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 OR10H3O60404 316 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 FPR3P25089 353 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 GTF2E2P29084 291 aaKnown RBP17.76■□□□□ 0.43
ACTB-210ENST00000477812 UQCRC1P31930 480 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 ELF3P78545 371 aaPredicted RBP17.76■□□□□ 0.43
ACTB-210ENST00000477812 FOXF2Q12947 444 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 POU4F3Q15319 338 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 MS4A18Q3C1V0 323 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 TMEM211Q6ICI0 200 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 OR2A2Q6IF42 318 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 SHQ1Q6PI26 577 aaKnown RBP17.76■□□□□ 0.43
ACTB-210ENST00000477812 NHLRC1Q6VVB1 395 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 RRM2BQ7LG56 351 aa17.76■□□□□ 0.43
ACTB-210ENST00000477812 HS3ST5Q8IZT8 346 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms